Mercurial > repos > metaboflow_cam > dimsp

diff dimsp/macros.xml @ 2:a8155d5840e9 draft default tip

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author metaboflow_cam
date Tue, 22 Oct 2019 04:06:06 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/dimsp/macros.xml	Tue Oct 22 04:06:06 2019 -0400
@@ -0,0 +1,33 @@
+<macros>
+  <xml name="requirements">
+    <requirements>
+      <requirement type="package" version="1.6.4">r-optparse</requirement>
+      <requirement type="package" version="5.0.0">r-writexls</requirement>
+      <requirement type="package" version="0.8.8">r-reshape</requirement>
+      <requirement type="package" version="0.20_38">r-lattice</requirement>
+      <requirement type="package" version="1.12.2">r-data.table</requirement>
+      <requirement type="package" version="3.6.1">bioconductor-xcms</requirement>
+      <requirement type="package" version="1.58.0">bioconductor-impute</requirement>
+      <requirement type="package" version="1.76.0">bioconductor-pcaMethods</requirement>
+    </requirements>
+  </xml>
+  <xml name="stdio">
+    <stdio>
+      <regex match="Execution halted"
+            source="both"
+            level="fatal"
+            description="Execution halted." />
+      <regex match="Error in"
+            source="both"
+            level="fatal"
+            description="An undefined error occurred, please check your input
+                          carefully and contact your administrator." />
+      <regex match="Fatal error"
+            source="both"
+            level="fatal"
+            description="An undefined error occurred, please check your input
+                          carefully and contact your administrator." />
+    </stdio>
+  </xml>
+
+</macros>