Mercurial > repos > metaboflow_cam > ionflow
diff ionflow/macros.xml @ 0:3b461dc9568b draft default tip
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author | metaboflow_cam |
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date | Mon, 09 Aug 2021 09:41:22 +0000 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/ionflow/macros.xml Mon Aug 09 09:41:22 2021 +0000 @@ -0,0 +1,44 @@ +<macros> + <xml name="requirements"> + <requirements> + <requirement type="package" version="1.6.6">r-optparse</requirement> + <requirement type="package" version="1.4.4">r-reshape2</requirement> + <requirement type="package" version="1.8.6">r-plyr</requirement> + <requirement type="package" version="1.0.6">r-dplyr</requirement> + <requirement type="package" version="1.1.3">r-tidyr</requirement> + <requirement type="package" version="3.3.3">r-ggplot2</requirement> + <requirement type="package" version="0.9.1">r-ggrepel</requirement> + <requirement type="package" version="0.89">r-corrplot</requirement> + <requirement type="package" version="3.1.1">r-gplots</requirement> + <requirement type="package" version="1.16.1">r-network</requirement> + <requirement type="package" version="2.6">r-sna</requirement> + <requirement type="package" version="2.1.1">r-ggally</requirement> + <requirement type="package" version="3.13.0">bioconductor-go.db</requirement> + <requirement type="package" version="2.58.0">bioconductor-gostats</requirement> + <requirement type="package" version="1.0.12">r-pheatmap</requirement> + <requirement type="package" version="1.2.6">r-igraph</requirement> + <requirement type="package" version="3.2.4">bioconductor-kegg.db</requirement> + <requirement type="package" version="3.13.0">bioconductor-org.sc.sgd.db</requirement> + <requirement type="package" version="3.13.0">bioconductor-org.hs.eg.db</requirement> + </requirements> + </xml> + <xml name="stdio"> + <stdio> + <regex match="Execution halted" + source="both" + level="fatal" + description="Execution halted." /> + <regex match="Error in" + source="both" + level="fatal" + description="An undefined error occurred, please check your input + carefully and contact your administrator." /> + <regex match="Fatal error" + source="both" + level="fatal" + description="An undefined error occurred, please check your input + carefully and contact your administrator." /> + </stdio> + </xml> + +</macros>