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comparison Dockerfile @ 6:7a6f2380fc1d draft

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planemo upload for repository https://forgemia.inra.fr/metexplore/met4j-galaxy
author metexplore
date Wed, 17 May 2023 13:26:37 +0000
parents dcd16521b969
children 0976a6257300
comparison
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5:35c9abcd8934 6:7a6f2380fc1d
1 1
2 FROM python:3.8-buster 2 FROM python:3.10-buster
3 3
4 # set author 4 # set author
5 MAINTAINER Ludovic Cottret <ludovic.cottret@inrae.fr> 5 MAINTAINER Ludovic Cottret <ludovic.cottret@inrae.fr>
6 6
7 # set encoding 7 # set encoding
42 && pip install virtualenv \ 42 && pip install virtualenv \
43 && python -m virtualenv "$PLANEMO_VENV_LOCATION" \ 43 && python -m virtualenv "$PLANEMO_VENV_LOCATION" \
44 && . "$PLANEMO_VENV_LOCATION"/bin/activate \ 44 && . "$PLANEMO_VENV_LOCATION"/bin/activate \
45 && pip install --upgrade pip setuptools \ 45 && pip install --upgrade pip setuptools \
46 && pip install planemo numpy \ 46 && pip install planemo numpy \
47 && planemo conda_init --conda_prefix "$CONDA" \
48 && apt-get clean autoclean \ 47 && apt-get clean autoclean \
49 && apt-get autoremove --yes \ 48 && apt-get autoremove --yes \
50 && rm -rf /var/lib/{apt,dpkg,cache,log}/ \ 49 && rm -rf /var/lib/{apt,dpkg,cache,log}/ \
51 && rm -rf /usr/bin/X11 \ 50 && rm -rf /usr/bin/X11 \
52 && rm -rf /tmp/* 51 && rm -rf /tmp/*