Mercurial > repos > metexplore > met4j

comparison tools/attributes/DecomposeSBML/DecomposeSBML.xml @ 6:7a6f2380fc1d draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://forgemia.inra.fr/metexplore/met4j-galaxy
author metexplore
date Wed, 17 May 2023 13:26:37 +0000
parents 35c9abcd8934
children
comparison
equal deleted inserted replaced
5:35c9abcd8934 6:7a6f2380fc1d
1 <?xml version="1.0" encoding="UTF-8"?> 1 <?xml version="1.0" encoding="UTF-8"?>
2 <tool id="met4j_DecomposeSBML" name="DecomposeSBML" version="1.2.1"> 2 <tool id="met4j_DecomposeSBML" name="DecomposeSBML" version="MET4J_VERSION_TEST">
3 <description>Parse SBML to render list of composing entities: metabolites, reactions, genes and others.</description> 3 <description>Parse SBML to render list of composing entities: metabolites, reactions, genes and others.</description>
4 <xrefs> 4 <xrefs>
5 <xref type="bio.tools">met4j</xref> 5 <xref type="bio.tools">met4j</xref>
6 </xrefs> 6 </xrefs>
7 <requirements> 7 <requirements>
8 <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:1.2.1</container> 8 <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:MET4J_VERSION_TEST</container>
9 </requirements> 9 </requirements>
10 <command detect_errors="exit_code"><![CDATA[sh /usr/bin/met4j.sh attributes.DecomposeSBML -i "$sbml" 10 <command detect_errors="exit_code"><![CDATA[sh /usr/bin/met4j.sh attributes.DecomposeSBML -i "$sbml"
11 $printMetabolites 11 $printMetabolites
12 $printReactions 12 $printReactions
13 $printCompartments 13 $printCompartments