Mercurial > repos > metexplore > met4j
comparison tools/attributes/ExtractSbmlAnnot/ExtractSbmlAnnot.xml @ 4:ae4c301919c4 draft
planemo upload for repository https://forgemia.inra.fr/metexplore/met4j-galaxy commit 2af2c8a0ca9665e1117bb7810bffc105ed39c4f5
author | metexplore |
---|---|
date | Thu, 17 Nov 2022 07:57:52 +0000 |
parents | 6bd9aad9626d |
children | 35c9abcd8934 |
comparison
equal
deleted
inserted
replaced
3:6bd9aad9626d | 4:ae4c301919c4 |
---|---|
1 <?xml version="1.0" encoding="UTF-8"?> | 1 <?xml version="1.0" encoding="UTF-8"?> |
2 <tool id="met4j_ExtractSbmlAnnot" name="ExtractSbmlAnnot" version="1.1.0"> | 2 <tool id="met4j_ExtractSbmlAnnot" name="ExtractSbmlAnnot" version="1.2.0"> |
3 <description>Extract databases' references from SBML annotations or notes.</description> | 3 <description>Extract databases' references from SBML annotations or notes.</description> |
4 <xrefs> | 4 <xrefs> |
5 <xref type="bio.tools">met4j</xref> | 5 <xref type="bio.tools">met4j</xref> |
6 </xrefs> | 6 </xrefs> |
7 <requirements> | 7 <requirements> |
8 <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:1.1.0</container> | 8 <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:1.2.0</container> |
9 </requirements> | 9 </requirements> |
10 <command detect_errors="exit_code"><![CDATA[sh /usr/bin/met4j.sh attributes.ExtractSbmlAnnot -i "$inputPath" | 10 <command detect_errors="exit_code"><![CDATA[sh /usr/bin/met4j.sh attributes.ExtractSbmlAnnot -i "$inputPath" |
11 -export "$export" | 11 -export "$export" |
12 -db "$db" | 12 -db "$db" |
13 $uniq | 13 $uniq |