Mercurial > repos > metexplore > met4j

diff tools/tool_conf.xml @ 8:1274e2a62479 draft default tip

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planemo upload for repository https://forgemia.inra.fr/metexplore/met4j-galaxy commit e34acf0f51cafcf6ae7c97b4feb3188a39f17c32
author metexplore
date Wed, 26 Jul 2023 15:33:45 +0000
parents 1436e9cde9c9
children
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--- a/tools/tool_conf.xml	Tue Jul 04 10:21:26 2023 +0000
+++ b/tools/tool_conf.xml	Wed Jul 26 15:33:45 2023 +0000
@@ -27,6 +27,7 @@
   <tool file="met4j/convert/Tab2Sbml/Tab2Sbml.xml"/>
   <section id="met4j_mapping" name="Met4J - mapping"/>
   <tool file="met4j/mapping/NameMatcher/NameMatcher.xml"/>
+  <tool file="met4j/mapping/ORApathwayEnrichment/ORApathwayEnrichment.xml"/>
   <section id="met4j_networkanalysis" name="Met4J - networkAnalysis"/>
   <tool file="met4j/networkAnalysis/BipartiteDistanceMatrix/BipartiteDistanceMatrix.xml"/>
   <tool file="met4j/networkAnalysis/CarbonSkeletonNet/CarbonSkeletonNet.xml"/>
@@ -43,9 +44,11 @@
   <tool file="met4j/networkAnalysis/NetworkSummary/NetworkSummary.xml"/>
   <tool file="met4j/networkAnalysis/PathwayNet/PathwayNet.xml"/>
   <tool file="met4j/networkAnalysis/PrecursorNetwork/PrecursorNetwork.xml"/>
+  <tool file="met4j/networkAnalysis/ReactionDistanceMatrix/ReactionDistanceMatrix.xml"/>
   <tool file="met4j/networkAnalysis/ScopeNetwork/ScopeNetwork.xml"/>
   <tool file="met4j/networkAnalysis/SeedsAndTargets/SeedsAndTargets.xml"/>
   <tool file="met4j/networkAnalysis/SideCompoundsScan/SideCompoundsScan.xml"/>
+  <tool file="met4j/networkAnalysis/TopologicalPathwayAnalysis/TopologicalPathwayAnalysis.xml"/>
   <section id="met4j_reconstruction" name="Met4J - reconstruction"/>
   <tool file="met4j/reconstruction/SbmlCheckBalance/SbmlCheckBalance.xml"/>
 </toolbox>