diff tools/attributes/SbmlSetRefsFromFile/SbmlSetRefsFromFile.xml @ 1:9b162ee6ff8e draft

planemo upload for repository https://forgemia.inra.fr/metexplore/met4j-galaxy commit 12798951d21c3b2b13514b38148b2848cb422c95
author metexplore
date Mon, 27 Jun 2022 13:41:08 +0000
parents dcd16521b969
children e69a78624877
line wrap: on
line diff
--- a/tools/attributes/SbmlSetRefsFromFile/SbmlSetRefsFromFile.xml	Fri Jun 10 10:31:34 2022 +0000
+++ b/tools/attributes/SbmlSetRefsFromFile/SbmlSetRefsFromFile.xml	Mon Jun 27 13:41:08 2022 +0000
@@ -1,11 +1,11 @@
 <?xml version="1.0" encoding="UTF-8"?>
-<tool id="met4j_SbmlSetRefsFromFile" name="SbmlSetRefsFromFile" version="0.11.0">
+<tool id="met4j_SbmlSetRefsFromFile" name="SbmlSetRefsFromFile" version="0.12.0">
   <description>Add refs to network objects from a tabulated file containing the metabolite ids and the formulas</description>
   <xrefs>
     <xref type="bio.tools">met4j</xref>
   </xrefs>
   <requirements>
-    <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:0.11.0</container>
+    <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:0.12.0</container>
   </requirements>
   <command detect_errors="exit_code"><![CDATA[sh /usr/bin/met4j.sh attributes.SbmlSetRefsFromFile#if str($colRef) != 'nan':
  -cr "$colRef"
@@ -84,4 +84,5 @@
   <help><![CDATA[Add refs to network objects from a tabulated file containing the metabolite ids and the formulas
 Reference name given as parameter (-ref) must correspond to an existing id the registry of  identifiers.org (https://registry.identifiers.org/registry)
 The corresponding key:value pair will be written as metabolite or reaction annotation]]></help>
+  <citations/>
 </tool>