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diff tools/met4j.yml @ 1:9b162ee6ff8e draft

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planemo upload for repository https://forgemia.inra.fr/metexplore/met4j-galaxy commit 12798951d21c3b2b13514b38148b2848cb422c95
author metexplore
date Mon, 27 Jun 2022 13:41:08 +0000
parents
children 6bd9aad9626d
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tools/met4j.yml	Mon Jun 27 13:41:08 2022 +0000
@@ -0,0 +1,92 @@
+---
+install_repository_dependencies: true
+install_resolver_dependencies: true
+install_tool_dependencies: false
+tools:
+  - name: ExtractPathways
+    owner: metexplore
+    tool_panel_section_id: met4j_attributes
+  - name: ExtractSbmlAnnot
+    owner: metexplore
+    tool_panel_section_id: met4j_attributes
+  - name: SbmlSetChargesFromFile
+    owner: metexplore
+    tool_panel_section_id: met4j_attributes
+  - name: SbmlSetEcsFromFile
+    owner: metexplore
+    tool_panel_section_id: met4j_attributes
+  - name: SbmlSetFormulasFromFile
+    owner: metexplore
+    tool_panel_section_id: met4j_attributes
+  - name: SbmlSetGprsFromFile
+    owner: metexplore
+    tool_panel_section_id: met4j_attributes
+  - name: SbmlSetNamesFromFile
+    owner: metexplore
+    tool_panel_section_id: met4j_attributes
+  - name: SbmlSetPathwaysFromFile
+    owner: metexplore
+    tool_panel_section_id: met4j_attributes
+  - name: SbmlSetRefsFromFile
+    owner: metexplore
+    tool_panel_section_id: met4j_attributes
+  - name: SbmlToMetaboliteTable
+    owner: metexplore
+    tool_panel_section_id: met4j_attributes
+  - name: GetModelProteome
+    owner: metexplore
+    tool_panel_section_id: met4j_bigg
+  - name: FbcToNotes
+    owner: metexplore
+    tool_panel_section_id: met4j_convert
+  - name: Kegg2Sbml
+    owner: metexplore
+    tool_panel_section_id: met4j_convert
+  - name: Sbml2Graph
+    owner: metexplore
+    tool_panel_section_id: met4j_convert
+  - name: Sbml2Tab
+    owner: metexplore
+    tool_panel_section_id: met4j_convert
+  - name: Tab2Sbml
+    owner: metexplore
+    tool_panel_section_id: met4j_convert
+  - name: CarbonSkeletonNet
+    owner: metexplore
+    tool_panel_section_id: met4j_networkanalysis
+  - name: ChokePoint
+    owner: metexplore
+    tool_panel_section_id: met4j_networkanalysis
+  - name: CompoundNet
+    owner: metexplore
+    tool_panel_section_id: met4j_networkanalysis
+  - name: DistanceMatrix
+    owner: metexplore
+    tool_panel_section_id: met4j_networkanalysis
+  - name: ExtractSubBipNetwork
+    owner: metexplore
+    tool_panel_section_id: met4j_networkanalysis
+  - name: ExtractSubNetwork
+    owner: metexplore
+    tool_panel_section_id: met4j_networkanalysis
+  - name: ExtractSubReactionNetwork
+    owner: metexplore
+    tool_panel_section_id: met4j_networkanalysis
+  - name: LoadPoint
+    owner: metexplore
+    tool_panel_section_id: met4j_networkanalysis
+  - name: MetaboRank
+    owner: metexplore
+    tool_panel_section_id: met4j_networkanalysis
+  - name: NetworkSummary
+    owner: metexplore
+    tool_panel_section_id: met4j_networkanalysis
+  - name: PrecursorNetwork
+    owner: metexplore
+    tool_panel_section_id: met4j_networkanalysis
+  - name: ScopeNetwork
+    owner: metexplore
+    tool_panel_section_id: met4j_networkanalysis
+  - name: SideCompoundsScan
+    owner: metexplore
+    tool_panel_section_id: met4j_networkanalysis