Mercurial > repos > metexplore > met4j
view data/Human-GEM_pathways.xml @ 1:9b162ee6ff8e draft
planemo upload for repository https://forgemia.inra.fr/metexplore/met4j-galaxy commit 12798951d21c3b2b13514b38148b2848cb422c95
| author | metexplore |
|---|---|
| date | Mon, 27 Jun 2022 13:41:08 +0000 |
| parents | dcd16521b969 |
| children |
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<?xml version="1.0" encoding="UTF-8"?> <sbml fbc:required="false" groups:required="false" level="3" version="2" xmlns="http://www.sbml.org/sbml/level3/version2/core" xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2" xmlns:groups="http://www.sbml.org/sbml/level3/version1/groups/version1"> <model fbc:strict="true" id="HumanGEM" metaid="HumanGEM" name="Generic genome-scale metabolic model of Homo sapiens"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Genome-scale metabolic models are valuable tools to study metabolism and provide a scaffold for the integrative analysis of omics data. This is the latest version of Human-GEM, which is a genome-scale metabolic model of a generic human cell. The objective of Human-GEM is to serve as a community model for enabling integrative and mechanistic studies of human metabolism.</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#HumanGEM"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/taxonomy/9606"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <fbc:listOfObjectives fbc:activeObjective="obj"> <fbc:objective fbc:id="obj" fbc:type="maximize"> <fbc:listOfFluxObjectives> <fbc:fluxObjective fbc:coefficient="1" fbc:reaction="R_biomass_human"/> </fbc:listOfFluxObjectives> </fbc:objective> </fbc:listOfObjectives> <fbc:listOfGeneProducts> <fbc:geneProduct fbc:id="ENSG00000023697" fbc:label="ENSG00000023697" fbc:name="ENSG00000023697" metaid="_12915ddf-e017-4a38-a80d-e9982f8ac7cc"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>ensembl: ENSG00000023697</p> 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<p>ncbigene: 57016</p> <p>uniprot: O60218</p> </body> </notes> </fbc:geneProduct> <fbc:geneProduct fbc:id="ENSG00000176020" fbc:label="ENSG00000176020" fbc:name="ENSG00000176020" metaid="_513bae08-bdd4-4b97-98ae-07e801676dfe"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>ensembl: ENSG00000176020</p> <p>hgnc.symbol: AMIGO3</p> <p>ncbigene: 386724</p> <p>uniprot: Q86WK7</p> </body> </notes> </fbc:geneProduct> <fbc:geneProduct fbc:id="ENSG00000156510" fbc:label="ENSG00000156510" fbc:name="ENSG00000156510" metaid="_61c6553c-2336-4290-82a1-7d87591a8fd8"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>ensembl: ENSG00000156510</p> <p>hgnc.symbol: HKDC1</p> <p>ncbigene: 80201</p> <p>uniprot: Q2TB90</p> </body> </notes> </fbc:geneProduct> <fbc:geneProduct fbc:id="ENSG00000108479" fbc:label="ENSG00000108479" fbc:name="ENSG00000108479" metaid="aacb39b1-6ea5-4359-97fc-d8c44b24d923"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>ensembl: ENSG00000108479</p> <p>hgnc.symbol: GALK1</p> <p>ncbigene: 2584</p> <p>uniprot: P51570</p> </body> </notes> </fbc:geneProduct> <fbc:geneProduct fbc:id="ENSG00000171174" fbc:label="ENSG00000171174" fbc:name="ENSG00000171174" metaid="d405b7b0-3b31-4a66-97af-a85fa4a32ce6"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>ensembl: ENSG00000171174</p> <p>hgnc.symbol: RBKS</p> <p>ncbigene: 64080</p> <p>uniprot: Q9H477</p> </body> </notes> </fbc:geneProduct> <fbc:geneProduct fbc:id="ENSG00000259030" fbc:label="ENSG00000259030" fbc:name="ENSG00000259030" metaid="df89c41c-5769-4933-a26d-75489f2009cb"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>ensembl: ENSG00000259030</p> <p>hgnc.symbol: FPGT-TNNI3K</p> <p>ncbigene: 100526835</p> </body> </notes> </fbc:geneProduct> <fbc:geneProduct fbc:id="ENSG00000078237" fbc:label="ENSG00000078237" fbc:name="ENSG00000078237" metaid="a9faff55-64a8-4038-b4b9-e85a053970f0"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>ensembl: ENSG00000078237</p> 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<p>ensembl: ENSG00000130066</p> <p>hgnc.symbol: SAT1</p> <p>ncbigene: 6303</p> <p>uniprot: P21673</p> </body> </notes> </fbc:geneProduct> <fbc:geneProduct fbc:id="ENSG00000152556" fbc:label="ENSG00000152556" fbc:name="ENSG00000152556" metaid="_9978139a-2d36-41b2-8a16-ae119ad9c62a"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>ensembl: ENSG00000152556</p> <p>hgnc.symbol: PFKM</p> <p>ncbigene: 5213</p> <p>uniprot: P08237</p> </body> </notes> </fbc:geneProduct> <fbc:geneProduct fbc:id="ENSG00000178802" fbc:label="ENSG00000178802" fbc:name="ENSG00000178802" metaid="_4cd75726-c25f-4f11-b645-1f763ef8eb84"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>ensembl: ENSG00000178802</p> <p>hgnc.symbol: MPI</p> <p>ncbigene: 4351</p> <p>uniprot: P34949</p> </body> </notes> </fbc:geneProduct> <fbc:geneProduct fbc:id="ENSG00000158019" fbc:label="ENSG00000158019" fbc:name="ENSG00000158019" metaid="_538c0091-8464-47eb-91e1-646a853db46d"> <notes> <body 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id="M_m01965c" initialConcentration="0" metaid="_94c2bee0-9d72-498c-ac24-cfc89072b989" name="glucose" sboTerm="SBO:0000247"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>kegg.compound: C00031</p> <p>hmdb: HMDB00122</p> <p>bigg.metabolite: glc__D</p> <p>chebi: CHEBI:4167</p> <p>pubchem.compound: 5793</p> <p>metanetx.chemical: MNXM41 || MNXM99</p> <p>formula: C6H12O6</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_94c2bee0-9d72-498c-ac24-cfc89072b989"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00031"/> <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00122"/> <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/glc__D"/> <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:4167"/> <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/5793"/> <rdf:li 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<species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H14O6" hasOnlySubstanceUnits="true" id="M_m01682c" initialConcentration="0" metaid="ae904b43-59ad-4e95-88e1-8e34700a9056" name="D-glucitol" sboTerm="SBO:0000247"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>kegg.compound: C00794</p> <p>hmdb: HMDB00247</p> <p>bigg.metabolite: sbt__D</p> <p>chebi: CHEBI:17924</p> <p>pubchem.compound: 5780</p> <p>metanetx.chemical: MNXM469</p> <p>formula: C6H14O6</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#ae904b43-59ad-4e95-88e1-8e34700a9056"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00794"/> <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00247"/> <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/sbt__D"/> <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:17924"/> <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/5780"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM469"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H13O9P" hasOnlySubstanceUnits="true" id="M_m02917c" initialConcentration="0" metaid="_42c68707-b6eb-4d18-8cc4-456bd62297d4" name="sorbitol-3-phosphate" sboTerm="SBO:0000247"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>pubchem.compound: 129544</p> <p>metanetx.chemical: MNXM48480</p> <p>formula: C6H13O9P</p> <p>charge: -2</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_42c68707-b6eb-4d18-8cc4-456bd62297d4"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/129544"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM48480"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition="false" compartment="l" constant="false" fbc:charge="0" fbc:chemicalFormula="H2O" hasOnlySubstanceUnits="true" id="M_m02040l" initialConcentration="0" metaid="eb95a981-8590-48ef-b0b9-b05c3507c687" name="H2O" sboTerm="SBO:0000247"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>lipidmaps: LMST01040128</p> <p>kegg.compound: C00001</p> <p>hmdb: HMDB02111</p> <p>bigg.metabolite: h2o</p> <p>chebi: CHEBI:15377</p> <p>pubchem.compound: 962</p> <p>metanetx.chemical: MNXM2</p> <p>formula: H2O</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#eb95a981-8590-48ef-b0b9-b05c3507c687"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/lipidmaps/LMST01040128"/> <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00001"/> <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB02111"/> <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/h2o"/> <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:15377"/> <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/962"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition="false" compartment="r" constant="false" fbc:charge="-2" fbc:chemicalFormula="C21H27N7O14P2" hasOnlySubstanceUnits="true" id="M_m02553r" initialConcentration="0" metaid="a2069c73-802b-49cf-8f06-0e3f0be5669b" name="NADH" sboTerm="SBO:0000247"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>kegg.compound: C00004</p> <p>hmdb: HMDB01487</p> <p>bigg.metabolite: nadh</p> <p>chebi: CHEBI:16908</p> <p>pubchem.compound: 928</p> <p>metanetx.chemical: MNXM10</p> <p>formula: C21H27N7O14P2</p> <p>charge: -2</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#a2069c73-802b-49cf-8f06-0e3f0be5669b"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00004"/> <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB01487"/> <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/nadh"/> <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:16908"/> <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/928"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM10"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition="false" compartment="l" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6" hasOnlySubstanceUnits="true" id="M_m01965l" initialConcentration="0" metaid="_25dd65f2-2228-440c-baf3-9f621a7e5ff0" name="glucose" sboTerm="SBO:0000247"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>kegg.compound: C00031</p> <p>hmdb: HMDB00122</p> <p>bigg.metabolite: glc__D</p> <p>chebi: CHEBI:4167</p> <p>pubchem.compound: 5793</p> <p>metanetx.chemical: MNXM41 || MNXM99</p> <p>formula: C6H12O6</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_25dd65f2-2228-440c-baf3-9f621a7e5ff0"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00031"/> <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00122"/> <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/glc__D"/> <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:4167"/> <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/5793"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM41"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM99"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition="false" compartment="s" constant="false" fbc:charge="-2" fbc:chemicalFormula="C21H27N7O14P2" hasOnlySubstanceUnits="true" id="M_m02553s" initialConcentration="0" metaid="c0b50a6c-29cd-4c06-82af-9fce71d23255" name="NADH" sboTerm="SBO:0000247"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>kegg.compound: C00004</p> <p>hmdb: HMDB01487</p> <p>bigg.metabolite: nadh</p> <p>chebi: CHEBI:16908</p> <p>pubchem.compound: 928</p> <p>metanetx.chemical: MNXM10</p> <p>formula: C21H27N7O14P2</p> <p>charge: -2</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#c0b50a6c-29cd-4c06-82af-9fce71d23255"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00004"/> <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB01487"/> <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/nadh"/> <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:16908"/> <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/928"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM10"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition="false" compartment="s" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6" hasOnlySubstanceUnits="true" id="M_m01965s" initialConcentration="0" metaid="ad2dbd72-4542-4c0b-8986-e308b158e31f" name="glucose" sboTerm="SBO:0000247"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>kegg.compound: C00031</p> <p>hmdb: HMDB00122</p> <p>bigg.metabolite: glc__D</p> <p>chebi: CHEBI:4167</p> <p>pubchem.compound: 5793</p> <p>metanetx.chemical: MNXM41 || MNXM99</p> <p>formula: C6H12O6</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#ad2dbd72-4542-4c0b-8986-e308b158e31f"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00031"/> <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00122"/> <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/glc__D"/> <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:4167"/> <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/5793"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM41"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM99"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition="false" compartment="s" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H18O8" hasOnlySubstanceUnits="true" id="M_m01913s" initialConcentration="0" metaid="ae24b707-1474-48c9-bc3e-184c9fc59f80" name="galactosylglycerol" sboTerm="SBO:0000247"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>kegg.compound: C05401</p> <p>chebi: CHEBI:15754</p> <p>pubchem.compound: 16048618</p> <p>metanetx.chemical: MNXM2608</p> <p>formula: C9H18O8</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#ae24b707-1474-48c9-bc3e-184c9fc59f80"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C05401"/> <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:15754"/> <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/16048618"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM2608"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="H2O" hasOnlySubstanceUnits="true" id="M_m02040c" initialConcentration="0" metaid="dce3ae33-5567-405a-9fd7-b571c4dce0b0" name="H2O" sboTerm="SBO:0000247"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>lipidmaps: LMST01040128</p> <p>kegg.compound: C00001</p> <p>hmdb: HMDB02111</p> <p>bigg.metabolite: h2o</p> <p>chebi: CHEBI:15377</p> <p>pubchem.compound: 962</p> <p>metanetx.chemical: MNXM2</p> <p>formula: H2O</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#dce3ae33-5567-405a-9fd7-b571c4dce0b0"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/lipidmaps/LMST01040128"/> <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00001"/> <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB02111"/> <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/h2o"/> <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:15377"/> <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/962"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-3" fbc:chemicalFormula="C10H11N4O11P2" hasOnlySubstanceUnits="true" id="M_m02161c" initialConcentration="0" metaid="_6588a61e-6e8e-4abf-b113-5c7d7bd46a74" name="IDP" sboTerm="SBO:0000247"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>kegg.compound: C00104</p> <p>bigg.metabolite: idp</p> <p>chebi: CHEBI:17808</p> <p>pubchem.compound: 6831</p> <p>metanetx.chemical: MNXM495</p> <p>formula: C10H11N4O11P2</p> <p>charge: -3</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_6588a61e-6e8e-4abf-b113-5c7d7bd46a74"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00104"/> <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/idp"/> <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:17808"/> <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/6831"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM495"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-1" fbc:chemicalFormula="C21H26N7O14P2" hasOnlySubstanceUnits="true" id="M_m02552c" initialConcentration="0" metaid="c7546c47-b436-4f42-b25c-6a7ba5aae2db" name="NAD+" sboTerm="SBO:0000247"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>kegg.compound: C00003</p> <p>hmdb: HMDB00902</p> <p>bigg.metabolite: nad</p> <p>chebi: CHEBI:15846</p> <p>pubchem.compound: 5893</p> <p>metanetx.chemical: MNXM8</p> <p>formula: C21H26N7O14P2</p> <p>charge: -1</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#c7546c47-b436-4f42-b25c-6a7ba5aae2db"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00003"/> <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00902"/> <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/nad"/> <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:15846"/> <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/5893"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM8"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-3" fbc:chemicalFormula="C10H12N5O11P2" hasOnlySubstanceUnits="true" id="M_m01948c" initialConcentration="0" metaid="a0bbd11c-f5e5-4615-aa55-824abf6e90cf" name="GDP" sboTerm="SBO:0000247"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>kegg.compound: C00035</p> <p>hmdb: HMDB01201</p> <p>bigg.metabolite: gdp</p> <p>chebi: CHEBI:17552</p> <p>pubchem.compound: 8977</p> <p>metanetx.chemical: MNXM30</p> <p>formula: C10H12N5O11P2</p> <p>charge: -3</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#a0bbd11c-f5e5-4615-aa55-824abf6e90cf"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00035"/> <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB01201"/> <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/gdp"/> <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:17552"/> <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/8977"/> <rdf:li 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</annotation> </species> <species boundaryCondition="false" compartment="r" constant="false" fbc:charge="-1" fbc:chemicalFormula="C21H26N7O14P2" hasOnlySubstanceUnits="true" id="M_m02552r" initialConcentration="0" metaid="_97a217ca-280a-4b3d-a2b8-ef92ea5df65e" name="NAD+" sboTerm="SBO:0000247"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>kegg.compound: C00003</p> <p>hmdb: HMDB00902</p> <p>bigg.metabolite: nad</p> <p>chebi: CHEBI:15846</p> <p>pubchem.compound: 5893</p> <p>metanetx.chemical: MNXM8</p> <p>formula: C21H26N7O14P2</p> <p>charge: -1</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_97a217ca-280a-4b3d-a2b8-ef92ea5df65e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00003"/> <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00902"/> <rdf:li 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id="M_m02034c" initialConcentration="0" metaid="_949f82be-8e6d-4143-98fb-13e8a920d815" name="GTP" sboTerm="SBO:0000247"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>kegg.compound: C00044</p> <p>hmdb: HMDB01273</p> <p>bigg.metabolite: gtp</p> <p>chebi: CHEBI:15996</p> <p>pubchem.compound: 6830</p> <p>metanetx.chemical: MNXM51</p> <p>formula: C10H12N5O14P3</p> <p>charge: -4</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_949f82be-8e6d-4143-98fb-13e8a920d815"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00044"/> <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB01273"/> <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/gtp"/> <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:15996"/> <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/6830"/> <rdf:li 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</rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6" hasOnlySubstanceUnits="true" id="M_m01745c" initialConcentration="0" metaid="a276d8cf-f71a-4d12-bd23-bd4bf3944d06" name="D-tagatose" sboTerm="SBO:0000247"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>kegg.compound: C00795</p> <p>hmdb: HMDB03418</p> <p>bigg.metabolite: tag__D</p> <p>chebi: CHEBI:47693</p> <p>pubchem.compound: 92092</p> <p>metanetx.chemical: MNXM92401</p> <p>formula: C6H12O6</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#a276d8cf-f71a-4d12-bd23-bd4bf3944d06"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00795"/> <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB03418"/> <rdf:li 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metaid="f88cd838-6cfd-4de1-80dd-47d8a4a5ec8c" name="ribulose-5-phosphate" sboTerm="SBO:0000247"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>kegg.compound: C00199</p> <p>bigg.metabolite: ru5p__D</p> <p>chebi: CHEBI:17363</p> <p>pubchem.compound: 439184</p> <p>metanetx.chemical: MNXM145 || MNXM186</p> <p>formula: C5H9O8P</p> <p>charge: -2</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#f88cd838-6cfd-4de1-80dd-47d8a4a5ec8c"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00199"/> <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/ru5p__D"/> <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:17363"/> <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/439184"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM145"/> <rdf:li 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fbc:chemicalFormula="C6H12O5" hasOnlySubstanceUnits="true" id="M_m01159c" initialConcentration="0" metaid="_5d92060a-34c2-413d-a5c9-b2061168b482" name="6-deoxy-L-galactose" sboTerm="SBO:0000247"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>kegg.compound: C01019</p> <p>hmdb: HMDB00174</p> <p>bigg.metabolite: fuc__L</p> <p>chebi: CHEBI:2181</p> <p>pubchem.compound: 17106</p> <p>metanetx.chemical: MNXM40586 || MNXM659</p> <p>formula: C6H12O5</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_5d92060a-34c2-413d-a5c9-b2061168b482"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C01019"/> <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00174"/> <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/fuc__L"/> <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:2181"/> <rdf:li 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rdf:about="#_00d6b0f7-372e-4bcd-b4e4-734060396c74"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00015"/> <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00295"/> <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/udp"/> <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:17659"/> <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/6031"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM17"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition="false" compartment="s" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6" hasOnlySubstanceUnits="true" id="M_m01910s" initialConcentration="0" metaid="_3719fc9b-15c2-48f2-af95-91380ed8985c" name="galactose" sboTerm="SBO:0000247"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>kegg.compound: C00984</p> <p>hmdb: HMDB00143</p> <p>bigg.metabolite: gal</p> <p>chebi: CHEBI:28061</p> <p>pubchem.compound: 439357</p> <p>metanetx.chemical: MNXM112 || MNXM390</p> <p>formula: C6H12O6</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_3719fc9b-15c2-48f2-af95-91380ed8985c"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00984"/> <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00143"/> <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/gal"/> <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:28061"/> <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/439357"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM112"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM390"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition="false" compartment="r" constant="false" fbc:charge="-2" fbc:chemicalFormula="C5H9O8P" hasOnlySubstanceUnits="true" id="M_m02845r" initialConcentration="0" metaid="c375b7d8-5974-4e81-bae4-6ffd881176d0" name="ribose-5-phosphate" sboTerm="SBO:0000247"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>kegg.compound: C00117</p> <p>bigg.metabolite: r5p</p> <p>chebi: CHEBI:17797</p> <p>pubchem.compound: 440101</p> <p>metanetx.chemical: MNXM116 || MNXM15900</p> <p>formula: C5H9O8P</p> <p>charge: -2</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#c375b7d8-5974-4e81-bae4-6ffd881176d0"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00117"/> <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/r5p"/> <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:17797"/> <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/440101"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM116"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM15900"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition="false" compartment="l" constant="false" fbc:charge="0" fbc:chemicalFormula="C12H22O11" hasOnlySubstanceUnits="true" id="M_m02332l" initialConcentration="0" metaid="_18aca9f4-b145-4984-986a-5b4334761e06" name="lactose" sboTerm="SBO:0000247"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>kegg.compound: C00243</p> <p>hmdb: HMDB00186</p> <p>bigg.metabolite: lcts</p> <p>chebi: CHEBI:36219</p> <p>pubchem.compound: 84571</p> <p>metanetx.chemical: MNXM362</p> <p>formula: C12H22O11</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_18aca9f4-b145-4984-986a-5b4334761e06"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00243"/> <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00186"/> <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/lcts"/> <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:36219"/> <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/84571"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM362"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H11O8P" hasOnlySubstanceUnits="true" id="M_m02372c" initialConcentration="0" metaid="d64f4610-d8ec-4669-a9cf-fd3e6e1a7f44" name="L-fucose-1-phosphate" sboTerm="SBO:0000247"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>kegg.compound: C02985</p> <p>bigg.metabolite: fuc1p__L</p> <p>chebi: CHEBI:28319</p> <p>pubchem.compound: 439871</p> <p>metanetx.chemical: MNXM1727</p> <p>formula: C6H11O8P</p> <p>charge: -2</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#d64f4610-d8ec-4669-a9cf-fd3e6e1a7f44"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C02985"/> <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/fuc1p__L"/> <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:28319"/> <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/439871"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM1727"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition="false" compartment="g" constant="false" fbc:charge="0" fbc:chemicalFormula="C12H22O11" hasOnlySubstanceUnits="true" id="M_m02332g" initialConcentration="0" metaid="f1b8e0f2-028c-4545-a1f4-bf750504814b" name="lactose" sboTerm="SBO:0000247"> <notes> <body 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boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="HO4P" hasOnlySubstanceUnits="true" id="M_m02751c" initialConcentration="0" metaid="c289024b-4290-4c49-b993-7aacf17d0e1b" name="Pi" sboTerm="SBO:0000247"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>kegg.compound: C00009</p> <p>bigg.metabolite: pi</p> <p>chebi: CHEBI:18367</p> <p>pubchem.compound: 1004</p> <p>metanetx.chemical: MNXM9</p> <p>formula: HO4P</p> <p>charge: -2</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#c289024b-4290-4c49-b993-7aacf17d0e1b"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00009"/> <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/pi"/> <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:18367"/> <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/1004"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM9"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C7H13O10P" hasOnlySubstanceUnits="true" id="M_m02884c" initialConcentration="0" metaid="_3392db14-e8b9-4ab8-9f26-2c9ecda86328" name="sedoheptulose-7-phosphate" sboTerm="SBO:0000247"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>kegg.compound: C05382</p> <p>bigg.metabolite: s7p</p> <p>chebi: CHEBI:15721</p> <p>pubchem.compound: 22833559</p> <p>metanetx.chemical: MNXM271</p> <p>formula: C7H13O10P</p> <p>charge: -2</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_3392db14-e8b9-4ab8-9f26-2c9ecda86328"> <bqbiol:is> <rdf:Bag> <rdf:li 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C01236</p> <p>bigg.metabolite: 6pgl</p> <p>chebi: CHEBI:16938</p> <p>pubchem.compound: 439452</p> <p>metanetx.chemical: MNXM429</p> <p>formula: C6H9O9P</p> <p>charge: -2</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_24aa4d4c-882c-444d-b1e4-8191e7fe20d9"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C01236"/> <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/6pgl"/> <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:16938"/> <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/439452"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM429"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6" hasOnlySubstanceUnits="true" id="M_m01840c" initialConcentration="0" metaid="_96ceef6d-b39c-45dc-a853-bd5aa0e6c22e" name="fructose" sboTerm="SBO:0000247"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>kegg.compound: C02336</p> <p>hmdb: HMDB00660</p> <p>bigg.metabolite: fru</p> <p>chebi: CHEBI:28645</p> <p>pubchem.compound: 439709</p> <p>metanetx.chemical: MNXM175</p> <p>formula: C6H12O6</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_96ceef6d-b39c-45dc-a853-bd5aa0e6c22e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C02336"/> <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00660"/> <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/fru"/> <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:28645"/> <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/439709"/> <rdf:li 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<notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>kegg.compound: C00345</p> <p>hmdb: HMDB01316</p> <p>bigg.metabolite: 6pgc</p> <p>chebi: CHEBI:48928</p> <p>pubchem.compound: 91493</p> <p>metanetx.chemical: MNXM325</p> <p>formula: C6H10O10P</p> <p>charge: -3</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#dfbe4e2b-1fd6-4a34-8064-53308f79888f"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00345"/> <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB01316"/> <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/6pgc"/> <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:48928"/> <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/91493"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM325"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition="false" compartment="r" constant="false" fbc:charge="1" fbc:chemicalFormula="H" hasOnlySubstanceUnits="true" id="M_m02039r" initialConcentration="0" metaid="a7079a2e-7f55-44c1-bcc2-5989ea949235" name="H+" sboTerm="SBO:0000247"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>kegg.compound: C00080</p> <p>bigg.metabolite: h</p> <p>chebi: CHEBI:24636</p> <p>pubchem.compound: 1038</p> <p>metanetx.chemical: MNXM1</p> <p>formula: H</p> <p>charge: 1</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#a7079a2e-7f55-44c1-bcc2-5989ea949235"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00080"/> <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/h"/> <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:24636"/> <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/1038"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition="false" compartment="s" constant="false" fbc:charge="1" fbc:chemicalFormula="H" hasOnlySubstanceUnits="true" id="M_m02039s" initialConcentration="0" metaid="_48b7ef43-d087-4f37-9392-1047b65c4dbd" name="H+" sboTerm="SBO:0000247"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>kegg.compound: C00080</p> <p>bigg.metabolite: h</p> <p>chebi: CHEBI:24636</p> <p>pubchem.compound: 1038</p> <p>metanetx.chemical: MNXM1</p> <p>formula: H</p> <p>charge: 1</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_48b7ef43-d087-4f37-9392-1047b65c4dbd"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00080"/> <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/h"/> <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:24636"/> <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/1038"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM1"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C3H5O6P" hasOnlySubstanceUnits="true" id="M_m01939c" initialConcentration="0" metaid="_6e928c86-cb07-4ee4-9da1-206e92aa5aae" name="GAP" sboTerm="SBO:0000247"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>kegg.compound: C00118</p> <p>bigg.metabolite: g3p</p> <p>chebi: CHEBI:29052</p> <p>pubchem.compound: 729</p> <p>metanetx.chemical: MNXM74</p> <p>formula: C3H5O6P</p> <p>charge: -2</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_6e928c86-cb07-4ee4-9da1-206e92aa5aae"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00118"/> <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/g3p"/> <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:29052"/> <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/729"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM74"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-4" fbc:chemicalFormula="C21H26N7O17P3" hasOnlySubstanceUnits="true" id="M_m02555c" initialConcentration="0" metaid="_4713da60-2315-4728-8c49-9d80e9d06982" name="NADPH" sboTerm="SBO:0000247"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>kegg.compound: C00005</p> <p>hmdb: HMDB00221</p> <p>bigg.metabolite: nadph</p> <p>chebi: CHEBI:16474</p> <p>pubchem.compound: 22833512</p> <p>metanetx.chemical: MNXM6</p> <p>formula: C21H26N7O17P3</p> <p>charge: -4</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_4713da60-2315-4728-8c49-9d80e9d06982"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00005"/> <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00221"/> <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/nadph"/> <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:16474"/> <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/22833512"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H11O9P" hasOnlySubstanceUnits="true" id="M_m01967c" initialConcentration="0" metaid="eb903c59-35de-4770-9346-d9840ea78b8b" name="glucose-1-phosphate" sboTerm="SBO:0000247"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>kegg.compound: C00103</p> <p>bigg.metabolite: g1p</p> <p>chebi: CHEBI:16077</p> <p>pubchem.compound: 65533</p> <p>metanetx.chemical: MNXM89588</p> <p>formula: C6H11O9P</p> <p>charge: -2</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#eb903c59-35de-4770-9346-d9840ea78b8b"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00103"/> <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/g1p"/> <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:16077"/> <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/65533"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM89588"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H10O4" hasOnlySubstanceUnits="true" id="M_m01672c" initialConcentration="0" metaid="c684250e-c857-4d7b-b61e-1695a0a407a8" name="deoxyribose" sboTerm="SBO:0000247"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>kegg.compound: C01801</p> <p>hmdb: HMDB03224</p> <p>bigg.metabolite: drib</p> <p>chebi: CHEBI:28816</p> <p>pubchem.compound: 22833604</p> <p>metanetx.chemical: MNXM90412 || MNXM2474</p> <p>formula: C5H10O4</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#c684250e-c857-4d7b-b61e-1695a0a407a8"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C01801"/> <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB03224"/> <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/drib"/> <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:28816"/> <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/22833604"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM90412"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM2474"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition="false" compartment="r" constant="false" fbc:charge="-4" fbc:chemicalFormula="C21H26N7O17P3" hasOnlySubstanceUnits="true" id="M_m02555r" initialConcentration="0" metaid="_9dd9e24d-3d87-43d4-a57f-7319fda9d5ae" name="NADPH" sboTerm="SBO:0000247"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>kegg.compound: C00005</p> <p>hmdb: HMDB00221</p> <p>bigg.metabolite: nadph</p> <p>chebi: CHEBI:16474</p> <p>pubchem.compound: 22833512</p> <p>metanetx.chemical: MNXM6</p> <p>formula: C21H26N7O17P3</p> <p>charge: -4</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_9dd9e24d-3d87-43d4-a57f-7319fda9d5ae"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00005"/> <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00221"/> <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/nadph"/> <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:16474"/> <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/22833512"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM6"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition="false" compartment="s" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H8O3" hasOnlySubstanceUnits="true" id="M_m01983s" initialConcentration="0" metaid="_681859d4-f24a-406f-8efe-f13934d5ffd5" name="glycerol" sboTerm="SBO:0000247"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>kegg.compound: C00116</p> <p>hmdb: HMDB00131</p> <p>bigg.metabolite: glyc</p> <p>chebi: CHEBI:17522</p> <p>pubchem.compound: 753</p> <p>metanetx.chemical: MNXM89612</p> <p>formula: C3H8O3</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_681859d4-f24a-406f-8efe-f13934d5ffd5"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00116"/> <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00131"/> <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/glyc"/> <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:17522"/> <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/753"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM89612"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-3" fbc:chemicalFormula="C21H25N7O17P3" hasOnlySubstanceUnits="true" id="M_m02554c" initialConcentration="0" metaid="_9d6ff91d-ad3d-4e8d-9c4a-fce47e8acd53" name="NADP+" sboTerm="SBO:0000247"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>kegg.compound: C00006</p> <p>hmdb: HMDB00217</p> <p>bigg.metabolite: nadp</p> <p>chebi: CHEBI:18009</p> <p>pubchem.compound: 5886</p> <p>metanetx.chemical: MNXM5</p> <p>formula: C21H25N7O17P3</p> <p>charge: -3</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_9d6ff91d-ad3d-4e8d-9c4a-fce47e8acd53"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00006"/> <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00217"/> <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/nadp"/> <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:18009"/> <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/5886"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H12O5" hasOnlySubstanceUnits="true" id="M_m02841c" initialConcentration="0" metaid="eb784776-6b61-4d67-9441-2af7f5d1e57f" name="ribitol" sboTerm="SBO:0000247"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>kegg.compound: C00474</p> <p>hmdb: HMDB00508</p> <p>bigg.metabolite: rbt</p> <p>chebi: CHEBI:15963</p> <p>pubchem.compound: 827</p> <p>metanetx.chemical: MNXM1820</p> <p>formula: C5H12O5</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#eb784776-6b61-4d67-9441-2af7f5d1e57f"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00474"/> <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00508"/> <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/rbt"/> <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:15963"/> <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/827"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM1820"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H11O9P" hasOnlySubstanceUnits="true" id="M_m01845c" initialConcentration="0" metaid="_435773db-71ea-408f-b0f1-852fadf7ea80" name="fructose-6-phosphate" sboTerm="SBO:0000247"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>kegg.compound: C00085</p> <p>bigg.metabolite: f6p</p> <p>chebi: CHEBI:15946</p> <p>pubchem.compound: 69507</p> <p>metanetx.chemical: MNXM89621 || MNXM162235</p> <p>formula: C6H11O9P</p> <p>charge: -2</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_435773db-71ea-408f-b0f1-852fadf7ea80"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00085"/> <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/f6p"/> <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:15946"/> <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/69507"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM89621"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM162235"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition="false" compartment="s" constant="false" fbc:charge="0" fbc:chemicalFormula="H2O" hasOnlySubstanceUnits="true" id="M_m02040s" initialConcentration="0" metaid="edc2812f-d50e-40df-9c9b-c62283dd5dfa" name="H2O" sboTerm="SBO:0000247"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>lipidmaps: LMST01040128</p> <p>kegg.compound: C00001</p> <p>hmdb: HMDB02111</p> <p>bigg.metabolite: h2o</p> <p>chebi: CHEBI:15377</p> <p>pubchem.compound: 962</p> <p>metanetx.chemical: MNXM2</p> <p>formula: H2O</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#edc2812f-d50e-40df-9c9b-c62283dd5dfa"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/lipidmaps/LMST01040128"/> <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00001"/> <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB02111"/> <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/h2o"/> <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:15377"/> <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/962"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-4" fbc:chemicalFormula="C9H11N2O15P3" hasOnlySubstanceUnits="true" id="M_m03130c" initialConcentration="0" metaid="_623bdee5-7e3f-429d-8798-39cae174c79d" name="UTP" sboTerm="SBO:0000247"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>kegg.compound: C00075</p> <p>hmdb: HMDB00285</p> <p>bigg.metabolite: utp</p> <p>chebi: CHEBI:15713</p> <p>pubchem.compound: 6133</p> <p>metanetx.chemical: MNXM121</p> <p>formula: C9H11N2O15P3</p> <p>charge: -4</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_623bdee5-7e3f-429d-8798-39cae174c79d"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00075"/> <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00285"/> <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/utp"/> <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:15713"/> <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/6133"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM121"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C7H13O10P" hasOnlySubstanceUnits="true" id="M_m03166c" initialConcentration="0" metaid="be62933b-1dd6-4a8b-87c9-a14eb36e9b49" name="sedoheptulose-1-phosphate" sboTerm="SBO:0000247"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>kegg.compound: C06222</p> <p>chebi: CHEBI:9082</p> <p>metanetx.chemical: MNXM12925</p> <p>formula: C7H13O10P</p> <p>charge: -2</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#be62933b-1dd6-4a8b-87c9-a14eb36e9b49"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C06222"/> <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:9082"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM12925"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-1" fbc:chemicalFormula="C6H11O7" hasOnlySubstanceUnits="true" id="M_m01683c" initialConcentration="0" metaid="_7e64183c-bff4-44e2-bdb9-41d69f6bed98" name="D-gluconic acid" sboTerm="SBO:0000247"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>kegg.compound: C00257</p> <p>hmdb: HMDB00625</p> <p>chebi: CHEBI:33198</p> <p>pubchem.compound: 10690</p> <p>metanetx.chemical: MNXM341</p> <p>formula: C6H11O7</p> <p>charge: -1</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_7e64183c-bff4-44e2-bdb9-41d69f6bed98"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00257"/> <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00625"/> <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:33198"/> <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/10690"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM341"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition="false" compartment="r" constant="false" fbc:charge="0" fbc:chemicalFormula="H2O" hasOnlySubstanceUnits="true" id="M_m02040r" initialConcentration="0" metaid="e3ae9f2d-61b6-4fc2-b932-c251c833a03e" name="H2O" sboTerm="SBO:0000247"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>lipidmaps: LMST01040128</p> <p>kegg.compound: C00001</p> <p>hmdb: HMDB02111</p> <p>bigg.metabolite: h2o</p> <p>chebi: CHEBI:15377</p> <p>pubchem.compound: 962</p> <p>metanetx.chemical: MNXM2</p> <p>formula: H2O</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#e3ae9f2d-61b6-4fc2-b932-c251c833a03e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/lipidmaps/LMST01040128"/> <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00001"/> <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB02111"/> <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/h2o"/> <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:15377"/> <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/962"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition="false" compartment="r" constant="false" fbc:charge="-3" fbc:chemicalFormula="C21H25N7O17P3" hasOnlySubstanceUnits="true" id="M_m02554r" initialConcentration="0" metaid="_2dffc121-cbfa-4ef2-bf72-85b96310b284" name="NADP+" sboTerm="SBO:0000247"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>kegg.compound: C00006</p> <p>hmdb: HMDB00217</p> <p>bigg.metabolite: nadp</p> <p>chebi: CHEBI:18009</p> <p>pubchem.compound: 5886</p> <p>metanetx.chemical: MNXM5</p> <p>formula: C21H25N7O17P3</p> <p>charge: -3</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_2dffc121-cbfa-4ef2-bf72-85b96310b284"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00006"/> <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00217"/> <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/nadp"/> <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:18009"/> <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/5886"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM5"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C5H9O7P" hasOnlySubstanceUnits="true" id="M_m00640c" initialConcentration="0" metaid="_646e6e22-6191-458f-b8cb-359247dfbf5f" name="2-deoxy-D-ribose-5-phosphate" sboTerm="SBO:0000247"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>kegg.compound: C00673</p> <p>bigg.metabolite: 2dr5p</p> <p>chebi: CHEBI:16132</p> <p>pubchem.compound: 45934311</p> <p>metanetx.chemical: MNXM2179</p> <p>formula: C5H9O7P</p> <p>charge: -2</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_646e6e22-6191-458f-b8cb-359247dfbf5f"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00673"/> <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/2dr5p"/> <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:16132"/> <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/45934311"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM2179"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> </listOfSpecies> <listOfParameters> <parameter constant="true" id="UPPER_BOUND_1000_0" units="mmol_per_gDW_per_hr" value="1000"/> <parameter constant="true" id="LOWER_BOUND_1000_0" units="mmol_per_gDW_per_hr" value="-1000"/> <parameter constant="true" id="LOWER_BOUND_0_0" units="mmol_per_gDW_per_hr" value="0"/> </listOfParameters> <listOfReactions> <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4831" metaid="a3b700c3-d335-4df3-bb92-f8fc04db5f3d" name="R_HMR_4831" reversible="true" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>ec-code: 1.1.99.13</p> <p>metanetx.reaction: MNXR107115</p> <p>kegg.reaction: R01680</p> <p>SUBSYSTEM: Galactose metabolism</p> <p>EC_NUMBER: 1.1.99.13</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#a3b700c3-d335-4df3-bb92-f8fc04db5f3d"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/1.1.99.13"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR107115"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01680"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference constant="true" species="M_m02552s" stoichiometry="1"/> <speciesReference constant="true" species="M_m02332s" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m02553s" stoichiometry="1"/> <speciesReference constant="true" species="M_m00812s" stoichiometry="1"/> <speciesReference constant="true" species="M_m02039s" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4710" metaid="e6a0e367-66fa-4310-a86d-7dde3669eac3" name="R_HMR_4710" reversible="true" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID:3023765</p> <p>ec-code: 5.4.2.7</p> <p>metanetx.reaction: MNXR103116</p> <p>kegg.reaction: R02749</p> <p>SUBSYSTEM: Pentose phosphate pathway</p> <p>EC_NUMBER: 5.4.2.7</p> <p>pmids: 3023765</p> <p>GENE_ASSOCIATION: ( ENSG00000169299 ) OR ( ENSG00000180953 )</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#e6a0e367-66fa-4310-a86d-7dde3669eac3"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/5.4.2.7"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR103116"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R02749"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/3023765"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="ENSG00000169299"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000180953"/> </fbc:or> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m00639c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m00640c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4832" metaid="_0a972dea-1cbc-4140-9dc6-ed7934752c06" name="R_HMR_4832" reversible="true" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID:3109378;UNIPROT:P16278</p> <p>ec-code: 3.2.1.23</p> <p>metanetx.reaction: MNXR109113 || MNXR105374</p> <p>kegg.reaction: R04783</p> <p>SUBSYSTEM: Galactose metabolism</p> <p>EC_NUMBER: 3.2.1.23</p> <p>pmids: 3109378</p> <p>GENE_ASSOCIATION: ENSG00000115850 AND ENSG00000163521 AND ENSG00000170266 AND ENSG00000188167</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_0a972dea-1cbc-4140-9dc6-ed7934752c06"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/3.2.1.23"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR109113"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR105374"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R04783"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/3109378"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="ENSG00000170266"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000163521"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000188167"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000115850"/> </fbc:and> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m00810s" stoichiometry="1"/> <speciesReference constant="true" species="M_m01965s" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m02040s" stoichiometry="1"/> <speciesReference constant="true" species="M_m00812s" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4315" metaid="_47e92709-8d94-4b33-a876-2890e1758a66" name="R_HMR_4315" reversible="true" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>ec-code: 1.1.1.14</p> <p>metanetx.reaction: MNXR104283</p> <p>kegg.reaction: R00875</p> <p>SUBSYSTEM: Fructose and mannose metabolism</p> <p>EC_NUMBER: 1.1.1.14</p> <p>GENE_ASSOCIATION: ENSG00000140263</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_47e92709-8d94-4b33-a876-2890e1758a66"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/1.1.1.14"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR104283"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R00875"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="ENSG00000140263"/> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m02552c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01682c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m01840c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02553c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4316" metaid="dc10854d-832c-4e85-a025-26973915eb3c" name="R_HMR_4316" reversible="true" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>ec-code: 1.1.1.21</p> <p>metanetx.reaction: MNXR104287</p> <p>kegg.reaction: R01787</p> <p>SUBSYSTEM: Fructose and mannose metabolism</p> <p>EC_NUMBER: 1.1.1.21</p> <p>GENE_ASSOCIATION: ( ENSG00000085662 ) OR ( ENSG00000198074 )</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#dc10854d-832c-4e85-a025-26973915eb3c"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/1.1.1.21"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR104287"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01787"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="ENSG00000198074"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000085662"/> </fbc:or> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m02554c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01682c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m01965c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02555c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4317" metaid="_36d1db72-1f57-4631-aff2-71a5a6395889" name="R_HMR_4317" reversible="false" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID:2211634</p> <p>ec-code: 2.7.1.-</p> <p>metanetx.reaction: MNXR103725</p> <p>SUBSYSTEM: Fructose and mannose metabolism</p> <p>EC_NUMBER: 2.7.1.-</p> <p>pmids: 2211634</p> <p>GENE_ASSOCIATION: ( ENSG00000116199 ) OR ( ENSG00000141560 ) OR ( ENSG00000162408 ) OR ( ENSG00000167363 ) OR ( ENSG00000172456 )</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_36d1db72-1f57-4631-aff2-71a5a6395889"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.-"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR103725"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/2211634"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="ENSG00000116199"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000141560"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000162408"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000172456"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000167363"/> </fbc:or> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01682c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m02917c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4318" metaid="_008e8008-7d8f-4404-bca8-d5c7e6a2b321" name="R_HMR_4318" reversible="false" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>ec-code: 2.7.1.-</p> <p>SUBSYSTEM: Fructose and mannose metabolism</p> <p>EC_NUMBER: 2.7.1.-</p> <p>GENE_ASSOCIATION: ( ENSG00000116199 ) OR ( ENSG00000141560 ) OR ( ENSG00000162408 ) OR ( ENSG00000167363 ) OR ( ENSG00000172456 )</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_008e8008-7d8f-4404-bca8-d5c7e6a2b321"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.-"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="ENSG00000116199"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000141560"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000162408"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000172456"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000167363"/> </fbc:or> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01840c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m01844c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_3944" metaid="e3f7be38-4458-4c4b-9e00-ba70676d46ba" name="R_HMR_3944" reversible="false" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID:223665;PMID:4433565;PMID:4436332;PMID:6318818;PMID:6320876;PMID:8612650</p> <p>ec-code: 2.7.7.9</p> <p>metanetx.reaction: MNXR100022</p> <p>kegg.reaction: R00289</p> <p>bigg.reaction: GALUi</p> <p>SUBSYSTEM: Galactose metabolism</p> <p>EC_NUMBER: 2.7.7.9</p> <p>pmids: 223665,4433565,4436332,6318818,6320876,8612650</p> <p>GENE_ASSOCIATION: ENSG00000169764</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#e3f7be38-4458-4c4b-9e00-ba70676d46ba"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.7.9"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR100022"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R00289"/> <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/GALUi"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/223665"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/6318818"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/8612650"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/6320876"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/4433565"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/4436332"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="ENSG00000169764"/> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m03130c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01967c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m03108c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02759c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4319" metaid="_45d0d167-05cb-4738-8b64-49f3791a4688" name="R_HMR_4319" reversible="false" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID:16906315;PMID:7061426;PMID:7150652;PMID:8717435</p> <p>ec-code: 2.7.1.1</p> <p>metanetx.reaction: MNXR100614</p> <p>kegg.reaction: R00760</p> <p>bigg.reaction: HEX7</p> <p>SUBSYSTEM: Fructose and mannose metabolism</p> <p>EC_NUMBER: 2.7.1.1</p> <p>pmids: 7061426,7150652,8717435,16906315</p> <p>GENE_ASSOCIATION: ( ENSG00000156510 ) OR ( ENSG00000156515 ) OR ( ENSG00000159399 ) OR ( ENSG00000160883 )</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_45d0d167-05cb-4738-8b64-49f3791a4688"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.1"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR100614"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R00760"/> <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/HEX7"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/7150652"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/7061426"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/16906315"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/8717435"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="ENSG00000159399"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000160883"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000156510"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000156515"/> </fbc:or> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01840c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01845c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_RPEc" metaid="_060005cd-e77c-4aec-9a9e-9953a24e631e" name="Ribulose 5-Phosphate 3-Epimerase" reversible="true" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID: 4382012, PMID: 13575411, Harpers illustrated Biochemistry (2009) 28th edition pages 174-183</p> <p>ec-code: 5.1.3.1</p> <p>bigg.reaction: RPEc</p> <p>SUBSYSTEM: Pentose phosphate pathway</p> <p>EC_NUMBER: 5.1.3.1</p> <p>pmids: 4382012,13575411</p> <p>GENE_ASSOCIATION: ENSG00000197713</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_060005cd-e77c-4aec-9a9e-9953a24e631e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/5.1.3.1"/> <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/RPEc"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/13575411"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/4382012"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="ENSG00000197713"/> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m02846c" stoichiometry="2"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m01761c" stoichiometry="2"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_GLYPHEHYc" metaid="_841ed12c-3095-4d2d-88c0-b2d51dc181bc" name="Hydrolysis of Glycylphenylalanine" reversible="true" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: most probable reaction. added during gap filling.</p> <p>metanetx.reaction: MNXR100357</p> <p>bigg.reaction: GLYPHEHYc</p> <p>SUBSYSTEM: Pentose phosphate pathway</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_841ed12c-3095-4d2d-88c0-b2d51dc181bc"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR100357"/> <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/GLYPHEHYc"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference constant="true" species="M_glyphe_c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02040c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m02724c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01986c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_8762" metaid="b7a3dbfa-eb0f-42d0-890e-a21c45957a2f" name="R_HMR_8762" reversible="true" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>ec-code: 4.1.2.13</p> <p>metanetx.reaction: MNXR99466</p> <p>bigg.reaction: FBP26</p> <p>SUBSYSTEM: Galactose metabolism</p> <p>EC_NUMBER: 4.1.2.13</p> <p>GENE_ASSOCIATION: ( ENSG00000109107 ) OR ( ENSG00000136872 ) OR ( ENSG00000149925 ) OR ( ENSG00000285043 )</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#b7a3dbfa-eb0f-42d0-890e-a21c45957a2f"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/4.1.2.13"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR99466"/> <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/FBP26"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="ENSG00000136872"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000149925"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000109107"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000285043"/> </fbc:or> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m01746c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m01690c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01981c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_7674" metaid="_3217a74c-f7b4-467b-a857-58e20a23c963" name="R_HMR_7674" reversible="false" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>ec-code: 2.4.1.22</p> <p>metanetx.reaction: MNXR105080</p> <p>kegg.reaction: R00503</p> <p>bigg.reaction: UGALGTg</p> <p>SUBSYSTEM: Galactose metabolism</p> <p>EC_NUMBER: 2.4.1.22</p> <p>GENE_ASSOCIATION: ( ENSG00000086062 ) OR ( ENSG00000117411 ) OR ( ENSG00000167531 )</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_3217a74c-f7b4-467b-a857-58e20a23c963"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/2.4.1.22"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR105080"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R00503"/> <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/UGALGTg"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="ENSG00000167531"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000086062"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000117411"/> </fbc:or> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m01965g" stoichiometry="1"/> <speciesReference constant="true" species="M_m03107g" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m02039g" stoichiometry="1"/> <speciesReference constant="true" species="M_m03106g" stoichiometry="1"/> <speciesReference constant="true" species="M_m02332g" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_8761" metaid="_9b5f5c01-dd04-4b3e-a91e-008503d581a0" name="R_HMR_8761" reversible="false" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>ec-code: 2.7.1.3</p> <p>metanetx.reaction: MNXR100938</p> <p>kegg.reaction: R02927</p> <p>bigg.reaction: KHK3</p> <p>SUBSYSTEM: Galactose metabolism</p> <p>EC_NUMBER: 2.7.1.3</p> <p>GENE_ASSOCIATION: ENSG00000138030</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_9b5f5c01-dd04-4b3e-a91e-008503d581a0"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.3"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR100938"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R02927"/> <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/KHK3"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="ENSG00000138030"/> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01745c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01746c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4320" metaid="a8abfc18-6328-4a50-8b08-d17a3f28c8b2" name="R_HMR_4320" reversible="false" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID:10085245</p> <p>ec-code: 2.7.1.-</p> <p>metanetx.reaction: MNXR103514</p> <p>SUBSYSTEM: Fructose and mannose metabolism</p> <p>EC_NUMBER: 2.7.1.-</p> <p>pmids: 10085245</p> <p>GENE_ASSOCIATION: ( ENSG00000116199 ) OR ( ENSG00000141560 ) OR ( ENSG00000162408 ) OR ( ENSG00000167363 ) OR ( ENSG00000172456 )</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#a8abfc18-6328-4a50-8b08-d17a3f28c8b2"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.-"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR103514"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/10085245"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="ENSG00000116199"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000141560"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000162408"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000172456"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000167363"/> </fbc:or> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m02454c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m01717c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_8766" metaid="_67a27b12-ccf1-4623-a972-3aff79c6f80d" name="R_HMR_8766" reversible="true" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>ec-code: 1.1.1.21</p> <p>metanetx.reaction: MNXR100012</p> <p>kegg.reaction: R01095</p> <p>bigg.reaction: GALSIDEtl</p> <p>SUBSYSTEM: Galactose metabolism</p> <p>EC_NUMBER: 1.1.1.21</p> <p>GENE_ASSOCIATION: ( ENSG00000085662 ) OR ( ENSG00000198074 )</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_67a27b12-ccf1-4623-a972-3aff79c6f80d"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/1.1.1.21"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR100012"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01095"/> <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/GALSIDEtl"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="ENSG00000198074"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000085662"/> </fbc:or> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m01910c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02555c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m02554c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01909c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_8767" metaid="_8b416bb5-ba06-4ea8-a781-6758242e28a2" name="R_HMR_8767" reversible="false" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>ec-code: 2.7.7.12</p> <p>metanetx.reaction: MNXR100027</p> <p>kegg.reaction: R00502</p> <p>bigg.reaction: GALt2_2</p> <p>SUBSYSTEM: Galactose metabolism</p> <p>EC_NUMBER: 2.7.7.12</p> <p>GENE_ASSOCIATION: ENSG00000213930</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_8b416bb5-ba06-4ea8-a781-6758242e28a2"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.7.12"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR100027"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R00502"/> <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/GALt2_2"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="ENSG00000213930"/> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m03130c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01322c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m02759c" stoichiometry="1"/> <speciesReference constant="true" species="M_m03107c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_8764" metaid="_4a18991c-afe6-4ab4-9518-7eea4183c3a8" name="R_HMR_8764" reversible="false" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>ec-code: 3.2.1.108</p> <p>metanetx.reaction: MNXR101000</p> <p>kegg.reaction: R06114</p> <p>bigg.reaction: LACZly</p> <p>SUBSYSTEM: Galactose metabolism</p> <p>EC_NUMBER: 3.2.1.108</p> <p>GENE_ASSOCIATION: ENSG00000115850</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_4a18991c-afe6-4ab4-9518-7eea4183c3a8"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/3.2.1.108"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR101000"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R06114"/> <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/LACZly"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="ENSG00000115850"/> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m02040l" stoichiometry="1"/> <speciesReference constant="true" species="M_m02332l" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m01910l" stoichiometry="1"/> <speciesReference constant="true" species="M_m01965l" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4400" metaid="_24e2c246-dc4f-43cb-b817-8363e45ca0f0" name="R_HMR_4400" reversible="false" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID:10410995;PMID:2428310;PMID:9603974</p> <p>ec-code: 1.1.1.271</p> <p>metanetx.reaction: MNXR100108 || MNXR105384</p> <p>kegg.reaction: R05692</p> <p>SUBSYSTEM: Fructose and mannose metabolism</p> <p>EC_NUMBER: 1.1.1.271</p> <p>pmids: 2428310,9603974,10410995</p> <p>GENE_ASSOCIATION: ENSG00000104522</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_24e2c246-dc4f-43cb-b817-8363e45ca0f0"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/1.1.1.271"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR100108"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR105384"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R05692"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/2428310"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/9603974"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/10410995"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="ENSG00000104522"/> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m01949c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02553c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m02552c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01950c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4565" metaid="dc55ec50-f182-42db-834f-d0cf1b380879" name="R_HMR_4565" reversible="true" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID:8549825;UNIPROT:P37837</p> <p>ec-code: 2.2.1.2</p> <p>metanetx.reaction: MNXR104715</p> <p>kegg.reaction: R08575</p> <p>bigg.reaction: TALA</p> <p>SUBSYSTEM: Pentose phosphate pathway</p> <p>EC_NUMBER: 2.2.1.2</p> <p>pmids: 8549825</p> <p>GENE_ASSOCIATION: ENSG00000177156</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#dc55ec50-f182-42db-834f-d0cf1b380879"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/2.2.1.2"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR104715"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R08575"/> <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/TALA"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/8549825"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="ENSG00000177156"/> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m01939c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02884c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m01785c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01845c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4841" metaid="f74d8639-e4ff-4f06-b6de-2c4de6cff989" name="R_HMR_4841" reversible="true" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID:15234337</p> <p>ec-code: 1.2.1.5</p> <p>metanetx.reaction: MNXR105388</p> <p>SUBSYSTEM: Pentose phosphate pathway</p> <p>EC_NUMBER: 1.2.1.5</p> <p>pmids: 15234337</p> <p>GENE_ASSOCIATION: ( ENSG00000006534 ) OR ( ENSG00000108602 ) OR ( ENSG00000132746 ) OR ( ENSG00000184254 )</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#f74d8639-e4ff-4f06-b6de-2c4de6cff989"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/1.2.1.5"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR105388"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/15234337"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="ENSG00000108602"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000132746"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000184254"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000006534"/> </fbc:or> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m02553c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02843c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m02552c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02841c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4401" metaid="_784dbb17-65c3-4806-8d58-6101b6f50cb1" name="R_HMR_4401" reversible="true" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID:5646162;PMID:6251080</p> <p>ec-code: 2.7.7.30</p> <p>metanetx.reaction: MNXR99061</p> <p>kegg.reaction: R01951</p> <p>bigg.reaction: F1PGT</p> <p>SUBSYSTEM: Fructose and mannose metabolism</p> <p>EC_NUMBER: 2.7.7.30</p> <p>pmids: 5646162,6251080</p> <p>GENE_ASSOCIATION: ( ENSG00000116783 ) OR ( ENSG00000254685 ) OR ( ENSG00000259030 )</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_784dbb17-65c3-4806-8d58-6101b6f50cb1"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.7.30"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR99061"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01951"/> <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/F1PGT"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/5646162"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/6251080"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="ENSG00000116783"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000254685"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000259030"/> </fbc:or> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m01950c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02759c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m02034c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02372c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_RE1342C" metaid="_35970be8-355d-4991-bcbd-bf773e56c260" name="Aldehyde Reductase" reversible="true" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID:9537432</p> <p>ec-code: 1.1.1.21</p> <p>metanetx.reaction: MNXR103511</p> <p>bigg.reaction: RE1342C</p> <p>SUBSYSTEM: Fructose and mannose metabolism</p> <p>EC_NUMBER: 1.1.1.21</p> <p>pmids: 9537432</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_35970be8-355d-4991-bcbd-bf773e56c260"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/1.1.1.21"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR103511"/> <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/RE1342C"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/9537432"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference constant="true" species="M_m02552c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01682c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m02553c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01965c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4402" metaid="f3a0a958-fed9-477e-ae39-8cdedad1f5bc" name="R_HMR_4402" reversible="true" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID:12056818;PMID:12413479</p> <p>ec-code: 2.7.1.52</p> <p>metanetx.reaction: MNXR99595 || MNXR107992</p> <p>kegg.reaction: R03161</p> <p>bigg.reaction: FK</p> <p>SUBSYSTEM: Fructose and mannose metabolism</p> <p>EC_NUMBER: 2.7.1.52</p> <p>pmids: 12056818,12413479</p> <p>GENE_ASSOCIATION: ENSG00000157353</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#f3a0a958-fed9-477e-ae39-8cdedad1f5bc"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.52"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR99595"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR107992"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R03161"/> <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/FK"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/12056818"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/12413479"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="ENSG00000157353"/> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m01159c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02372c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4567" metaid="_9ff90316-748a-4f8a-91f7-86e61fbd681e" name="R_HMR_4567" reversible="true" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID:4084320;PMID:4272358</p> <p>ec-code: 2.7.1.11</p> <p>metanetx.reaction: MNXR105338 || MNXR102510</p> <p>kegg.reaction: R01843</p> <p>SUBSYSTEM: Pentose phosphate pathway</p> <p>EC_NUMBER: 2.7.1.11</p> <p>pmids: 4084320,4272358</p> <p>GENE_ASSOCIATION: ( ENSG00000067057 ) OR ( ENSG00000141959 ) OR ( ENSG00000152556 )</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_9ff90316-748a-4f8a-91f7-86e61fbd681e"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.11"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR105338"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR102510"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01843"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/4272358"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/4084320"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="ENSG00000067057"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000141959"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000152556"/> </fbc:or> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m02883c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02884c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4403" metaid="_41178734-fe7b-47f2-b84a-e69e20728adb" name="R_HMR_4403" reversible="false" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID:457669;PMID:5050937</p> <p>ec-code: 5.3.1.25</p> <p>metanetx.reaction: MNXR99468 || MNXR107994</p> <p>kegg.reaction: R03163</p> <p>SUBSYSTEM: Fructose and mannose metabolism</p> <p>EC_NUMBER: 5.3.1.25</p> <p>pmids: 457669,5050937</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_41178734-fe7b-47f2-b84a-e69e20728adb"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/5.3.1.25"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR99468"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR107994"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R03163"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/457669"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/5050937"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference constant="true" species="M_m01159c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m02373c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4568" metaid="_414cb744-0f0d-4837-b547-ca5fc7b2529a" name="R_HMR_4568" reversible="true" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID:11945275</p> <p>ec-code: 2.7.1.11</p> <p>metanetx.reaction: MNXR105339</p> <p>SUBSYSTEM: Pentose phosphate pathway</p> <p>EC_NUMBER: 2.7.1.11</p> <p>pmids: 11945275</p> <p>GENE_ASSOCIATION: ( ENSG00000067057 ) OR ( ENSG00000141959 ) OR ( ENSG00000152556 )</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_414cb744-0f0d-4837-b547-ca5fc7b2529a"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.11"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR105339"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/11945275"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="ENSG00000067057"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000141959"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000152556"/> </fbc:or> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m03106c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02883c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m03130c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02884c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4128" metaid="_093ee677-4ba5-4528-856e-60f371fedfe8" name="R_HMR_4128" reversible="true" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID:191453;PMID:845161</p> <p>ec-code: 5.1.3.2</p> <p>metanetx.reaction: MNXR105057</p> <p>kegg.reaction: R00291</p> <p>bigg.reaction: UDPG4E</p> <p>SUBSYSTEM: Galactose metabolism</p> <p>EC_NUMBER: 5.1.3.2</p> <p>pmids: 191453,845161</p> <p>GENE_ASSOCIATION: ENSG00000117308</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_093ee677-4ba5-4528-856e-60f371fedfe8"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/5.1.3.2"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR105057"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R00291"/> <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/UDPG4E"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/845161"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/191453"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="ENSG00000117308"/> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m03107c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m03108c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_8768" metaid="_8bcb4fd6-2dbe-4ec7-a1ff-10766373c9c1" name="R_HMR_8768" reversible="false" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>ec-code: 1.1.1.271</p> <p>metanetx.reaction: MNXR100108</p> <p>kegg.reaction: R05692</p> <p>bigg.reaction: GFUCS</p> <p>SUBSYSTEM: Fructose and mannose metabolism</p> <p>EC_NUMBER: 1.1.1.271</p> <p>GENE_ASSOCIATION: ENSG00000104522</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_8bcb4fd6-2dbe-4ec7-a1ff-10766373c9c1"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/1.1.1.271"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR100108"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R05692"/> <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/GFUCS"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="ENSG00000104522"/> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m01949c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02555c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m01950c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02554c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4404" metaid="_53153327-0fb7-4573-bd62-024a6dbd9d90" name="R_HMR_4404" reversible="true" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID:234468;PMID:2495942;PMID:2843500;PMID:3089282;PMID:5141430;PMID:7115375;PMID:7154948;PMID:9924800</p> <p>ec-code: 2.2.1.1</p> <p>metanetx.reaction: MNXR104869 || MNXR106812</p> <p>kegg.reaction: R01067</p> <p>bigg.reaction: TKT2</p> <p>SUBSYSTEM: Pentose phosphate pathway</p> <p>EC_NUMBER: 2.2.1.1</p> <p>pmids: 234468,2495942,2843500,3089282,5141430,7115375,7154948,9924800</p> <p>GENE_ASSOCIATION: ( ENSG00000007350 ) OR ( ENSG00000151005 ) OR ( ENSG00000163931 )</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_53153327-0fb7-4573-bd62-024a6dbd9d90"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/2.2.1.1"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR104869"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR106812"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01067"/> <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/TKT2"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/2495942"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/7115375"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/234468"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/2843500"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/9924800"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/5141430"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/7154948"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/3089282"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="ENSG00000163931"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000007350"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000151005"/> </fbc:or> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m01761c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01785c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m01939c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01845c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4490" metaid="f0088831-0d71-400f-b3b3-78d25c47e1f4" name="R_HMR_4490" reversible="false" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID:16906315;PMID:7061426;PMID:7150652;PMID:8717435</p> <p>ec-code: 2.7.1.1</p> <p>metanetx.reaction: MNXR95795</p> <p>kegg.reaction: R01326</p> <p>bigg.reaction: HEX4</p> <p>SUBSYSTEM: Fructose and mannose metabolism</p> <p>EC_NUMBER: 2.7.1.1</p> <p>pmids: 7061426,7150652,8717435,16906315</p> <p>GENE_ASSOCIATION: ( ENSG00000156510 ) OR ( ENSG00000156515 ) OR ( ENSG00000159399 ) OR ( ENSG00000160883 )</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#f0088831-0d71-400f-b3b3-78d25c47e1f4"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.1"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR95795"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01326"/> <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/HEX4"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/7150652"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/7061426"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/16906315"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/8717435"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="ENSG00000159399"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000160883"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000156510"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000156515"/> </fbc:or> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02453c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m02455c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4052" metaid="f3773fb2-a697-4ad0-b9c8-70f626e44da0" name="R_HMR_4052" reversible="false" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID:11101685;PMID:7572345</p> <p>ec-code: 2.7.6.1</p> <p>metanetx.reaction: MNXR106802 || MNXR103215</p> <p>kegg.reaction: R01049</p> <p>bigg.reaction: PRPPS</p> <p>SUBSYSTEM: Pentose phosphate pathway</p> <p>EC_NUMBER: 2.7.6.1</p> <p>pmids: 7572345,11101685</p> <p>GENE_ASSOCIATION: ( ENSG00000101911 ) OR ( ENSG00000147224 ) OR ( ENSG00000229937 )</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#f3773fb2-a697-4ad0-b9c8-70f626e44da0"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.6.1"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR106802"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR103215"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01049"/> <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/PRPPS"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/7572345"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/11101685"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="ENSG00000147224"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000229937"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000101911"/> </fbc:or> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m02845c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m01334c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02806c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4130" metaid="a1e6f11c-2c01-45d7-aa41-39764568a681" name="R_HMR_4130" reversible="false" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>ec-code: 2.7.1.6</p> <p>metanetx.reaction: MNXR99985</p> <p>bigg.reaction: GALKr</p> <p>SUBSYSTEM: Galactose metabolism</p> <p>EC_NUMBER: 2.7.1.6</p> <p>GENE_ASSOCIATION: ( ENSG00000108479 ) OR ( ENSG00000156958 )</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#a1e6f11c-2c01-45d7-aa41-39764568a681"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.6"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR99985"/> <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/GALKr"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="ENSG00000108479"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000156958"/> </fbc:or> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m01910c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m01322c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_8653" metaid="_22f2d06f-d7c0-4287-a929-46293b17c7af" name="R_HMR_8653" reversible="true" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>ec-code: 3.1.1.31</p> <p>metanetx.reaction: MNXR99907</p> <p>kegg.reaction: R10520</p> <p>bigg.reaction: G6PDH2r</p> <p>SUBSYSTEM: Pentose phosphate pathway</p> <p>EC_NUMBER: 3.1.1.31</p> <p>GENE_ASSOCIATION: ( ENSG00000049239 ) OR ( ENSG00000130313 )</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_22f2d06f-d7c0-4287-a929-46293b17c7af"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/3.1.1.31"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR99907"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R10520"/> <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/G6PDH2r"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="ENSG00000049239"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000130313"/> </fbc:or> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m01961r" stoichiometry="1"/> <speciesReference constant="true" species="M_m02553r" stoichiometry="1"/> <speciesReference constant="true" species="M_m02039r" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m01968r" stoichiometry="1"/> <speciesReference constant="true" species="M_m02552r" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4131" metaid="fba7f9cd-fa2b-4c7a-a4a5-02318cc57a68" name="R_HMR_4131" reversible="true" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>ec-code: 2.7.7.12</p> <p>metanetx.reaction: MNXR105090</p> <p>kegg.reaction: R00955</p> <p>bigg.reaction: UGLT</p> <p>SUBSYSTEM: Galactose metabolism</p> <p>EC_NUMBER: 2.7.7.12</p> <p>GENE_ASSOCIATION: ENSG00000213930</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#fba7f9cd-fa2b-4c7a-a4a5-02318cc57a68"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.7.12"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR105090"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R00955"/> <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/UGLT"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="ENSG00000213930"/> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m03107c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01967c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m03108c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01322c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4297" metaid="c5cf5503-7811-4ea5-b3d5-159879fdbf6a" name="R_HMR_4297" reversible="false" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID:7506254;PMID:7688733</p> <p>ec-code: 2.7.1.105</p> <p>metanetx.reaction: MNXR102508</p> <p>kegg.reaction: R00757</p> <p>bigg.reaction: PFK26</p> <p>SUBSYSTEM: Fructose and mannose metabolism</p> <p>EC_NUMBER: 2.7.1.105</p> <p>pmids: 7506254,7688733</p> <p>GENE_ASSOCIATION: ( ENSG00000114268 ) OR ( ENSG00000123836 ) OR ( ENSG00000158571 ) OR ( ENSG00000170525 )</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#c5cf5503-7811-4ea5-b3d5-159879fdbf6a"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.105"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR102508"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R00757"/> <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/PFK26"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/7688733"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/7506254"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="ENSG00000123836"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000170525"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000114268"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000158571"/> </fbc:or> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01845c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m01843c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4132" metaid="_7fd1e0ad-5113-42aa-963e-6215ef481843" name="R_HMR_4132" reversible="false" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID:10993714</p> <p>ec-code: 2.7.7.12</p> <p>metanetx.reaction: MNXR105090</p> <p>kegg.reaction: R00955</p> <p>SUBSYSTEM: Galactose metabolism</p> <p>EC_NUMBER: 2.7.7.12</p> <p>pmids: 10993714</p> <p>GENE_ASSOCIATION: ENSG00000213930</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_7fd1e0ad-5113-42aa-963e-6215ef481843"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.7.12"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR105090"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R00955"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/10993714"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="ENSG00000213930"/> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m01911c" stoichiometry="1"/> <speciesReference constant="true" species="M_m03108c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m03107c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01967c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_0454" metaid="c76ba226-384c-4b57-84b2-6140f038c756" name="R_HMR_0454" reversible="false" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID:12125098</p> <p>ec-code: 2.7.1.28</p> <p>metanetx.reaction: MNXR104940</p> <p>kegg.reaction: R01059</p> <p>bigg.reaction: TRIOK</p> <p>SUBSYSTEM: Fructose and mannose metabolism</p> <p>EC_NUMBER: 2.7.1.28</p> <p>pmids: 12125098</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#c76ba226-384c-4b57-84b2-6140f038c756"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.28"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR104940"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01059"/> <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/TRIOK"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/12125098"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01981c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m01939c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4774" metaid="_3d04496d-3c88-44ef-a0f4-1566551ef2a7" name="R_HMR_4774" reversible="true" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID:131802;PMID:1810251;PMID:193556;PMID:2987258;PMID:6091737</p> <p>ec-code: 2.7.1.11</p> <p>metanetx.reaction: MNXR108039 || MNXR105355</p> <p>kegg.reaction: R03237</p> <p>SUBSYSTEM: Galactose metabolism</p> <p>EC_NUMBER: 2.7.1.11</p> <p>pmids: 131802,193556,1810251,2987258,6091737</p> <p>GENE_ASSOCIATION: ( ENSG00000067057 ) OR ( ENSG00000141959 ) OR ( ENSG00000152556 )</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_3d04496d-3c88-44ef-a0f4-1566551ef2a7"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.11"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR108039"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR105355"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R03237"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/1810251"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/6091737"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/193556"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/2987258"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/131802"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="ENSG00000067057"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000141959"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000152556"/> </fbc:or> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m01424c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02955c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m01623c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01746c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4775" metaid="b71ca27b-2233-4904-bf68-12c5c97c9300" name="R_HMR_4775" reversible="true" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID:131802;PMID:1810251</p> <p>ec-code: 2.7.1.11</p> <p>metanetx.reaction: MNXR105356 || MNXR108041</p> <p>kegg.reaction: R03239</p> <p>SUBSYSTEM: Galactose metabolism</p> <p>EC_NUMBER: 2.7.1.11</p> <p>pmids: 131802,1810251</p> <p>GENE_ASSOCIATION: ( ENSG00000067057 ) OR ( ENSG00000141959 ) OR ( ENSG00000152556 )</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#b71ca27b-2233-4904-bf68-12c5c97c9300"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.11"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR105356"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR108041"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R03239"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/1810251"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/131802"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="ENSG00000067057"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000141959"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000152556"/> </fbc:or> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m02193c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01746c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m02161c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02955c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4414" metaid="b4722a38-261b-454e-93b5-c84c4aa10035" name="R_HMR_4414" reversible="false" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID:8908517</p> <p>ec-code: 2.7.1.6</p> <p>metanetx.reaction: MNXR99985</p> <p>kegg.reaction: R01092</p> <p>SUBSYSTEM: Galactose metabolism</p> <p>EC_NUMBER: 2.7.1.6</p> <p>pmids: 8908517</p> <p>GENE_ASSOCIATION: ( ENSG00000108479 ) OR ( ENSG00000156958 ) OR ( ENSG00000166262 )</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#b4722a38-261b-454e-93b5-c84c4aa10035"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.6"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR99985"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01092"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/8908517"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="ENSG00000108479"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000156958"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000166262"/> </fbc:or> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m01910c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m01911c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4415" metaid="_0e1118fe-ec5c-4f40-b7ba-0a043f91a0d0" name="R_HMR_4415" reversible="false" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID:6786877</p> <p>ec-code: 3.2.1.108 || 3.2.1.23</p> <p>metanetx.reaction: MNXR101000</p> <p>kegg.reaction: R01100</p> <p>bigg.reaction: LACZe</p> <p>SUBSYSTEM: Galactose metabolism</p> <p>EC_NUMBER: 3.2.1.23;3.2.1.108</p> <p>pmids: 6786877</p> <p>GENE_ASSOCIATION: ENSG00000115850 AND ENSG00000163521 AND ENSG00000170266 AND ENSG00000188167</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_0e1118fe-ec5c-4f40-b7ba-0a043f91a0d0"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/3.2.1.108"/> <rdf:li rdf:resource="https://identifiers.org/ec-code/3.2.1.23"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR101000"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01100"/> <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/LACZe"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/6786877"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:and> <fbc:geneProductRef fbc:geneProduct="ENSG00000170266"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000163521"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000188167"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000115850"/> </fbc:and> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m02040s" stoichiometry="1"/> <speciesReference constant="true" species="M_m02332s" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m01910s" stoichiometry="1"/> <speciesReference constant="true" species="M_m01965s" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4416" metaid="b1a0bbd3-03c8-481d-87b1-808aebb90ef2" name="R_HMR_4416" reversible="false" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID:3569296</p> <p>ec-code: 3.2.1.23 || 3.2.1.22</p> <p>metanetx.reaction: MNXR100115</p> <p>kegg.reaction: R01104</p> <p>SUBSYSTEM: Galactose metabolism</p> <p>EC_NUMBER: 3.2.1.22;3.2.1.23</p> <p>pmids: 3569296</p> <p>GENE_ASSOCIATION: ( ENSG00000102393 ) OR ( ENSG00000170266 ) OR ( ENSG00000241343 )</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#b1a0bbd3-03c8-481d-87b1-808aebb90ef2"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/3.2.1.23"/> <rdf:li rdf:resource="https://identifiers.org/ec-code/3.2.1.22"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR100115"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01104"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/3569296"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="ENSG00000102393"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000170266"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000241343"/> </fbc:or> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m02040s" stoichiometry="1"/> <speciesReference constant="true" species="M_m01913s" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m01910s" stoichiometry="1"/> <speciesReference constant="true" species="M_m01983s" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_FBA5" metaid="f429561f-98d2-434a-860a-ddff29f21ebd" name="D-Tagatose 1-Phosphate D-Glyceraldehyde-3-Phosphate-Lyase" reversible="true" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID:2996495,PMID:6284103,PMID:6298387</p> <p>ec-code: 4.1.2.13</p> <p>metanetx.reaction: MNXR99463</p> <p>bigg.reaction: FBA5</p> <p>SUBSYSTEM: Galactose metabolism</p> <p>EC_NUMBER: 4.1.2.13</p> <p>pmids: 2996495,6284103,6298387</p> <p>GENE_ASSOCIATION: ENSG00000136872</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#f429561f-98d2-434a-860a-ddff29f21ebd"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/4.1.2.13"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR99463"/> <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/FBA5"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/2996495"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/6298387"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/6284103"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="ENSG00000136872"/> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_tag1p_D_c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m01690c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01981c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_PGLc" metaid="_3648fd3f-6668-495c-b2e0-e7ce9105a0bd" name="6-Phosphogluconolactonase" reversible="false" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID: 4382012, PMID: 13575411, Harpers illustrated Biochemistry (2009) 28th edition pages 174-183</p> <p>ec-code: 3.1.1.31</p> <p>bigg.reaction: PGLc</p> <p>SUBSYSTEM: Pentose phosphate pathway</p> <p>EC_NUMBER: 3.1.1.31</p> <p>pmids: 4382012,13575411</p> <p>GENE_ASSOCIATION: ENSG00000130313</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_3648fd3f-6668-495c-b2e0-e7ce9105a0bd"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/3.1.1.31"/> <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/PGLc"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/13575411"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/4382012"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="ENSG00000130313"/> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m02040c" stoichiometry="3"/> <speciesReference constant="true" species="M_m01961c" stoichiometry="3"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m01169c" stoichiometry="3"/> <speciesReference constant="true" species="M_m02039c" stoichiometry="3"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4383" metaid="_0ea26d9f-b8bd-4193-8626-31efb5856906" name="R_HMR_4383" reversible="true" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID:10571009;PMID:12231825;PMID:15033941;PMID:2085314;PMID:7702210;PMID:8381960</p> <p>ec-code: 5.3.1.8</p> <p>metanetx.reaction: MNXR106679 || MNXR101382</p> <p>kegg.reaction: R00772</p> <p>bigg.reaction: MAN6PI</p> <p>SUBSYSTEM: Fructose and mannose metabolism</p> <p>EC_NUMBER: 5.3.1.8</p> <p>pmids: 2085314,7702210,8381960,10571009,12231825,15033941</p> <p>GENE_ASSOCIATION: ENSG00000178802</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_0ea26d9f-b8bd-4193-8626-31efb5856906"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/5.3.1.8"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR106679"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR101382"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R00772"/> <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/MAN6PI"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/10571009"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/15033941"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/7702210"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/8381960"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/12231825"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/2085314"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="ENSG00000178802"/> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m01845c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m02455c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_GNDc" metaid="ef163958-45f6-498d-acb0-0e2d72945b19" name="Phosphogluconate Dehydrogenase" reversible="false" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID: 4382012, PMID: 13575411, Harpers illustrated Biochemistry (2009) 28th edition pages 174-183</p> <p>ec-code: 1.1.1.44</p> <p>bigg.reaction: GNDc</p> <p>SUBSYSTEM: Pentose phosphate pathway</p> <p>EC_NUMBER: 1.1.1.44</p> <p>pmids: 4382012,13575411</p> <p>GENE_ASSOCIATION: ENSG00000142657</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#ef163958-45f6-498d-acb0-0e2d72945b19"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/1.1.1.44"/> <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/GNDc"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/13575411"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/4382012"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="ENSG00000142657"/> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m01169c" stoichiometry="3"/> <speciesReference constant="true" species="M_m02554c" stoichiometry="3"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m02846c" stoichiometry="3"/> <speciesReference constant="true" species="M_m02555c" stoichiometry="3"/> <speciesReference constant="true" species="M_m01596c" stoichiometry="3"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4385" metaid="_83fb9834-0745-47d2-b88f-9cb966a0eefd" name="R_HMR_4385" reversible="false" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID:10593562;PMID:12889654;PMID:15361947</p> <p>ec-code: 5.4.2.8</p> <p>metanetx.reaction: MNXR101729</p> <p>kegg.reaction: R01818</p> <p>bigg.reaction: PMANM</p> <p>SUBSYSTEM: Fructose and mannose metabolism</p> <p>EC_NUMBER: 5.4.2.8</p> <p>pmids: 10593562,12889654,15361947</p> <p>GENE_ASSOCIATION: ( ENSG00000100413 ) OR ( ENSG00000100417 ) OR ( ENSG00000140650 )</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_83fb9834-0745-47d2-b88f-9cb966a0eefd"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/5.4.2.8"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR101729"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01818"/> <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/PMANM"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/15361947"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/12889654"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/10593562"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="ENSG00000140650"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000100417"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000100413"/> </fbc:or> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m02455c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m02454c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4386" metaid="_1b139dd2-60dd-4d29-b9db-c7cd0c97d62b" name="R_HMR_4386" reversible="false" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID:13876695</p> <p>ec-code: 2.7.7.13 || 2.7.7.22</p> <p>metanetx.reaction: MNXR101376</p> <p>kegg.reaction: R00883</p> <p>bigg.reaction: MAN1PT2</p> <p>SUBSYSTEM: Fructose and mannose metabolism</p> <p>EC_NUMBER: 2.7.7.22;2.7.7.13</p> <p>pmids: 13876695</p> <p>GENE_ASSOCIATION: ( ENSG00000144591 ) OR ( ENSG00000164068 ) OR ( ENSG00000173540 ) OR ( ENSG00000176020 )</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_1b139dd2-60dd-4d29-b9db-c7cd0c97d62b"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.7.13"/> <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.7.22"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR101376"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R00883"/> <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/MAN1PT2"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/13876695"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="ENSG00000164068"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000176020"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000173540"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000144591"/> </fbc:or> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m01948c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02454c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m01951c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02751c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_ABTD1" metaid="_030d6c02-c016-4e4d-a3a0-100f8b573715" name="L-Arabinitol 4-Dehydrogenase" reversible="true" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID: 16435225</p> <p>ec-code: 3.1.1.4</p> <p>bigg.reaction: ABTD1</p> <p>SUBSYSTEM: Pentose phosphate pathway</p> <p>EC_NUMBER: 3.1.1.4</p> <p>pmids: 16435225</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_030d6c02-c016-4e4d-a3a0-100f8b573715"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/3.1.1.4"/> <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/ABTD1"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/16435225"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference constant="true" species="M_m02552c" stoichiometry="1"/> <speciesReference constant="true" species="M_abt_D_c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m02553c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02425c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4387" metaid="_642e9305-23e4-4e3a-b6ef-fe32f9051987" name="R_HMR_4387" reversible="false" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID:10025667;PMID:8549746;PMID:9451026</p> <p>ec-code: 2.7.7.13</p> <p>metanetx.reaction: MNXR101375</p> <p>kegg.reaction: R00885</p> <p>SUBSYSTEM: Fructose and mannose metabolism</p> <p>EC_NUMBER: 2.7.7.13</p> <p>pmids: 8549746,9451026,10025667</p> <p>GENE_ASSOCIATION: ( ENSG00000144591 ) OR ( ENSG00000173540 ) OR ( ENSG00000176020 )</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_642e9305-23e4-4e3a-b6ef-fe32f9051987"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.7.13"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR101375"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R00885"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/8549746"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/9451026"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/10025667"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="ENSG00000176020"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000173540"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000144591"/> </fbc:or> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m02454c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02034c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m01951c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02759c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_9799" metaid="_57352ce2-7ff7-4510-8c37-fe046275ab37" name="R_HMR_9799" reversible="true" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>ec-code: 2.7.1.14</p> <p>metanetx.reaction: MNXR107202</p> <p>kegg.reaction: R01844</p> <p>SUBSYSTEM: Pentose phosphate pathway</p> <p>EC_NUMBER: 2.7.1.14</p> <p>GENE_ASSOCIATION: ENSG00000197417</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_57352ce2-7ff7-4510-8c37-fe046275ab37"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.14"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR107202"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01844"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="ENSG00000197417"/> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> <speciesReference constant="true" species="M_m03165c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m02884c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4303" metaid="_073189d4-50c2-4cf1-b826-23bdb07507f8" name="R_HMR_4303" reversible="false" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID:12055199</p> <p>ec-code: 3.2.1.48 || 3.2.1.10 || 3.2.1.20</p> <p>metanetx.reaction: MNXR104638</p> <p>kegg.reaction: R00801</p> <p>bigg.reaction: SUCRe</p> <p>SUBSYSTEM: Galactose metabolism</p> <p>EC_NUMBER: 3.2.1.10;3.2.1.20;3.2.1.48</p> <p>pmids: 12055199</p> <p>GENE_ASSOCIATION: ( ENSG00000090402 ) OR ( ENSG00000171298 ) OR ( ENSG00000214013 ) OR ( ENSG00000257335 )</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_073189d4-50c2-4cf1-b826-23bdb07507f8"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/3.2.1.48"/> <rdf:li rdf:resource="https://identifiers.org/ec-code/3.2.1.10"/> <rdf:li rdf:resource="https://identifiers.org/ec-code/3.2.1.20"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR104638"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R00801"/> <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/SUCRe"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/12055199"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="ENSG00000171298"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000257335"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000090402"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000214013"/> </fbc:or> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m02040s" stoichiometry="1"/> <speciesReference constant="true" species="M_m02945s" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m01965s" stoichiometry="1"/> <speciesReference constant="true" species="M_m01840s" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4501" metaid="_94343e1c-c62d-4149-953b-237ef55a08ca" name="R_HMR_4501" reversible="true" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID:13385248;PMID:2495942;UNIPROT:P29401</p> <p>ec-code: 2.2.1.1</p> <p>metanetx.reaction: MNXR107105 || MNXR104868</p> <p>kegg.reaction: R01641</p> <p>bigg.reaction: TKT1</p> <p>SUBSYSTEM: Pentose phosphate pathway</p> <p>EC_NUMBER: 2.2.1.1</p> <p>pmids: 2495942,13385248</p> <p>GENE_ASSOCIATION: ( ENSG00000007350 ) OR ( ENSG00000151005 ) OR ( ENSG00000163931 )</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_94343e1c-c62d-4149-953b-237ef55a08ca"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/2.2.1.1"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR107105"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR104868"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01641"/> <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/TKT1"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/2495942"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/13385248"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="ENSG00000163931"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000007350"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000151005"/> </fbc:or> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m02845c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01761c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m01939c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02884c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4304" metaid="_4a19056f-9291-4536-aee2-1f674e94327c" name="R_HMR_4304" reversible="false" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID:15774558;PMID:16756494;PMID:2753047;PMID:4169027</p> <p>ec-code: 1.1.1.49</p> <p>metanetx.reaction: MNXR99907</p> <p>kegg.reaction: R00835</p> <p>bigg.reaction: G6PDH2er</p> <p>SUBSYSTEM: Pentose phosphate pathway</p> <p>EC_NUMBER: 1.1.1.49</p> <p>pmids: 2753047,4169027,15774558,16756494</p> <p>GENE_ASSOCIATION: ENSG00000160211</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_4a19056f-9291-4536-aee2-1f674e94327c"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/1.1.1.49"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR99907"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R00835"/> <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/G6PDH2er"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/16756494"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/4169027"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/2753047"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/15774558"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="ENSG00000160211"/> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m01968r" stoichiometry="1"/> <speciesReference constant="true" species="M_m02554r" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m01961r" stoichiometry="1"/> <speciesReference constant="true" species="M_m02555r" stoichiometry="1"/> <speciesReference constant="true" species="M_m02039r" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4623" metaid="_977981ea-549f-4af8-8bc9-8f06a599033d" name="R_HMR_4623" reversible="false" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID:3858849;PMID:3932573;PMID:6852020;PMID:971315</p> <p>ec-code: 3.1.1.31</p> <p>metanetx.reaction: MNXR102539</p> <p>kegg.reaction: R02035</p> <p>bigg.reaction: PGLer</p> <p>SUBSYSTEM: Pentose phosphate pathway</p> <p>EC_NUMBER: 3.1.1.31</p> <p>pmids: 971315,3858849,3932573,6852020</p> <p>GENE_ASSOCIATION: ( ENSG00000049239 ) OR ( ENSG00000130313 )</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_977981ea-549f-4af8-8bc9-8f06a599033d"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/3.1.1.31"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR102539"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R02035"/> <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/PGLer"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/3932573"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/3858849"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/6852020"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/971315"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="ENSG00000049239"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000130313"/> </fbc:or> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m01961r" stoichiometry="1"/> <speciesReference constant="true" species="M_m02040r" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m01169r" stoichiometry="1"/> <speciesReference constant="true" species="M_m02039r" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4306" metaid="c51de190-dee0-491f-93ed-9eebe9f571ff" name="R_HMR_4306" reversible="true" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID:15774558;PMID:16756494;PMID:2753047;PMID:4169027</p> <p>ec-code: 1.1.1.49</p> <p>metanetx.reaction: MNXR99907</p> <p>kegg.reaction: R00835</p> <p>bigg.reaction: G6PDH2r</p> <p>SUBSYSTEM: Pentose phosphate pathway</p> <p>EC_NUMBER: 1.1.1.49</p> <p>pmids: 2753047,4169027,15774558,16756494</p> <p>GENE_ASSOCIATION: ENSG00000160211</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#c51de190-dee0-491f-93ed-9eebe9f571ff"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/1.1.1.49"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR99907"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R00835"/> <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/G6PDH2r"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/16756494"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/4169027"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/2753047"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/15774558"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="ENSG00000160211"/> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m01961c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02555c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m02554c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01968c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4625" metaid="ce25ac8c-d5cd-45bf-aa0f-b5091cc8f920" name="R_HMR_4625" reversible="false" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID:3858849;PMID:3932573;PMID:6852020;PMID:971315</p> <p>ec-code: 3.1.1.31</p> <p>metanetx.reaction: MNXR102539</p> <p>kegg.reaction: R02035</p> <p>bigg.reaction: PGL</p> <p>SUBSYSTEM: Pentose phosphate pathway</p> <p>EC_NUMBER: 3.1.1.31</p> <p>pmids: 971315,3858849,3932573,6852020</p> <p>GENE_ASSOCIATION: ( ENSG00000049239 ) OR ( ENSG00000130313 )</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#ce25ac8c-d5cd-45bf-aa0f-b5091cc8f920"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/3.1.1.31"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR102539"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R02035"/> <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/PGL"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/3932573"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/3858849"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/6852020"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/971315"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="ENSG00000049239"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000130313"/> </fbc:or> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m02040c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01961c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m01169c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4706" metaid="_76f44f32-e827-409c-9f89-d39564cf363b" name="R_HMR_4706" reversible="false" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID:11245921;PMID:12379646;PMID:15170386;PMID:15581487;PMID:16316985;PMID:2837207</p> <p>ec-code: 3.1.3.46 || 3.1.3.11</p> <p>metanetx.reaction: MNXR106671 || MNXR99466</p> <p>kegg.reaction: R00763</p> <p>bigg.reaction: FBP26</p> <p>SUBSYSTEM: Fructose and mannose metabolism</p> <p>EC_NUMBER: 3.1.3.46;3.1.3.11</p> <p>pmids: 2837207,11245921,12379646,15170386,15581487,16316985</p> <p>GENE_ASSOCIATION: ( ENSG00000078237 ) OR ( ENSG00000108813 ) OR ( ENSG00000114268 ) OR ( ENSG00000123836 ) OR ( ENSG00000158571 ) OR ( ENSG00000170525 )</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_76f44f32-e827-409c-9f89-d39564cf363b"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/3.1.3.46"/> <rdf:li rdf:resource="https://identifiers.org/ec-code/3.1.3.11"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR106671"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR99466"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R00763"/> <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/FBP26"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/16316985"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/12379646"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/15581487"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/15170386"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/11245921"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/2837207"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="ENSG00000123836"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000170525"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000108813"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000158571"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000078237"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000114268"/> </fbc:or> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m02040c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01843c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m02751c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01845c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_G6PDH2c" metaid="_65f65765-bf14-48a2-8308-72aa949d0dd7" name="Glucose 6-Phosphate Dehydrogenase" reversible="false" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID: 4382012, PMID: 13575411, Harpers illustrated Biochemistry (2009) 28th edition pages 174-183</p> <p>bigg.reaction: G6PDH2c</p> <p>SUBSYSTEM: Pentose phosphate pathway</p> <p>pmids: 4382012,13575411</p> <p>GENE_ASSOCIATION: ENSG00000160211</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_65f65765-bf14-48a2-8308-72aa949d0dd7"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/G6PDH2c"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/13575411"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/4382012"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="ENSG00000160211"/> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m02554c" stoichiometry="3"/> <speciesReference constant="true" species="M_m01968c" stoichiometry="3"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m01961c" stoichiometry="3"/> <speciesReference constant="true" species="M_m02555c" stoichiometry="3"/> <speciesReference constant="true" species="M_m02039c" stoichiometry="3"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_8074" metaid="c6249ea1-2eba-44b9-b389-c3bb870070af" name="R_HMR_8074" reversible="false" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>ec-code: 2.7.1.15</p> <p>metanetx.reaction: MNXR97787</p> <p>kegg.reaction: R02750</p> <p>bigg.reaction: DRPA</p> <p>SUBSYSTEM: Pentose phosphate pathway</p> <p>EC_NUMBER: 2.7.1.15</p> <p>GENE_ASSOCIATION: ( ENSG00000158019 ) OR ( ENSG00000171174 )</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#c6249ea1-2eba-44b9-b389-c3bb870070af"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.15"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR97787"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R02750"/> <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/DRPA"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="ENSG00000171174"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000158019"/> </fbc:or> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01672c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> <speciesReference constant="true" species="M_m00640c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4350" metaid="cd869f58-5452-4226-8cfe-b859d4054a8f" name="R_HMR_4350" reversible="true" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID:13295274;PMID:17618002</p> <p>ec-code: 2.7.1.15</p> <p>metanetx.reaction: MNXR106804 || MNXR103431</p> <p>kegg.reaction: R01051</p> <p>bigg.reaction: RBK</p> <p>SUBSYSTEM: Pentose phosphate pathway</p> <p>EC_NUMBER: 2.7.1.15</p> <p>pmids: 13295274,17618002</p> <p>GENE_ASSOCIATION: ( ENSG00000158019 ) OR ( ENSG00000171174 )</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#cd869f58-5452-4226-8cfe-b859d4054a8f"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.15"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR106804"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR103431"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01051"/> <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/RBK"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/13295274"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/17618002"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="ENSG00000171174"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000158019"/> </fbc:or> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m02845c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02843c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_KHK3" metaid="_2f83a279-1e91-4c20-ab35-0fbd94c31885" name="Ketohexokinase (D-Tagatose)" reversible="false" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID:2996495,PMID:6284103,PMID:6298387</p> <p>ec-code: 2.7.1.3</p> <p>metanetx.reaction: MNXR100938</p> <p>bigg.reaction: KHK3</p> <p>SUBSYSTEM: Galactose metabolism</p> <p>EC_NUMBER: 2.7.1.3</p> <p>pmids: 2996495,6284103,6298387</p> <p>GENE_ASSOCIATION: ENSG00000138030</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_2f83a279-1e91-4c20-ab35-0fbd94c31885"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.3"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR100938"/> <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/KHK3"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/2996495"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/6298387"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/6284103"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="ENSG00000138030"/> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01745c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_tag1p_D_c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4351" metaid="_6bfc4346-8d59-4fd8-af6b-41405b4de8a1" name="R_HMR_4351" reversible="true" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID:14690456;PMID:14988808;PMID:15234337;PMID:2843500</p> <p>ec-code: 5.3.1.6</p> <p>metanetx.reaction: MNXR104084 || MNXR106809</p> <p>kegg.reaction: R01056</p> <p>SUBSYSTEM: Pentose phosphate pathway</p> <p>EC_NUMBER: 5.3.1.6</p> <p>pmids: 2843500,14690456,14988808,15234337</p> <p>GENE_ASSOCIATION: ENSG00000153574</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_6bfc4346-8d59-4fd8-af6b-41405b4de8a1"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/5.3.1.6"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR104084"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR106809"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01056"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/2843500"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/14690456"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/15234337"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/14988808"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="ENSG00000153574"/> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m02845r" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m02846r" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4473" metaid="c7c1f092-4aea-48a2-8d25-feb3f47ea431" name="R_HMR_4473" reversible="false" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID:12398160;PMID:1504088;PMID:15558954;PMID:16756494;PMID:2753047;PMID:3943305;PMID:6212636;PMID:7194116;PMID:7225115;PMID:7623792</p> <p>ec-code: 1.1.1.44</p> <p>metanetx.reaction: MNXR100389</p> <p>kegg.reaction: R01528</p> <p>bigg.reaction: GNDer</p> <p>SUBSYSTEM: Pentose phosphate pathway</p> <p>EC_NUMBER: 1.1.1.44</p> <p>pmids: 1504088,2753047,3943305,6212636,7194116,7225115,7623792,12398160,15558954,16756494</p> <p>GENE_ASSOCIATION: ENSG00000142657</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#c7c1f092-4aea-48a2-8d25-feb3f47ea431"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/1.1.1.44"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR100389"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01528"/> <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/GNDer"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/16756494"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/6212636"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/7623792"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/3943305"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/7225115"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/15558954"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/7194116"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/12398160"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/2753047"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/1504088"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="ENSG00000142657"/> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m01169r" stoichiometry="1"/> <speciesReference constant="true" species="M_m02554r" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m02846r" stoichiometry="1"/> <speciesReference constant="true" species="M_m02555r" stoichiometry="1"/> <speciesReference constant="true" species="M_m01596r" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4352" metaid="be77e7e9-9978-4d8f-9533-2dd900d0bde5" name="R_HMR_4352" reversible="true" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID:14690456;PMID:14988808;PMID:15234337;PMID:2843500</p> <p>ec-code: 5.3.1.6</p> <p>metanetx.reaction: MNXR104084 || MNXR106809</p> <p>kegg.reaction: R01056</p> <p>bigg.reaction: RPI</p> <p>SUBSYSTEM: Pentose phosphate pathway</p> <p>EC_NUMBER: 5.3.1.6</p> <p>pmids: 2843500,14690456,14988808,15234337</p> <p>GENE_ASSOCIATION: ENSG00000153574</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#be77e7e9-9978-4d8f-9533-2dd900d0bde5"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/5.3.1.6"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR104084"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR106809"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01056"/> <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/RPI"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/2843500"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/14690456"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/15234337"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/14988808"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="ENSG00000153574"/> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m02845c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m02846c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4474" metaid="_83d5dfd1-ca06-416b-8f50-068a6b157458" name="R_HMR_4474" reversible="false" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID:12398160;PMID:1504088;PMID:15558954;PMID:16756494;PMID:2753047;PMID:3943305;PMID:6212636;PMID:7194116;PMID:7225115;PMID:7623792</p> <p>ec-code: 1.1.1.44</p> <p>metanetx.reaction: MNXR100389</p> <p>kegg.reaction: R01528</p> <p>bigg.reaction: GND</p> <p>SUBSYSTEM: Pentose phosphate pathway</p> <p>EC_NUMBER: 1.1.1.44</p> <p>pmids: 1504088,2753047,3943305,6212636,7194116,7225115,7623792,12398160,15558954,16756494</p> <p>GENE_ASSOCIATION: ENSG00000142657</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_83d5dfd1-ca06-416b-8f50-068a6b157458"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/1.1.1.44"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR100389"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01528"/> <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/GND"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/16756494"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/6212636"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/7623792"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/3943305"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/7225115"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/15558954"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/7194116"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/12398160"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/2753047"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/1504088"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="ENSG00000142657"/> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m01169c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02554c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m02846c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02555c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01596c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_9800" metaid="_329c99c1-064e-4527-a8da-785581323147" name="R_HMR_9800" reversible="true" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>ec-code: 2.7.1.3</p> <p>metanetx.reaction: MNXR108451</p> <p>kegg.reaction: R03819</p> <p>SUBSYSTEM: Pentose phosphate pathway</p> <p>EC_NUMBER: 2.7.1.3</p> <p>GENE_ASSOCIATION: ENSG00000138030</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_329c99c1-064e-4527-a8da-785581323147"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.3"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR108451"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R03819"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="ENSG00000138030"/> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> <speciesReference constant="true" species="M_m03165c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m03166c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4398" metaid="c2e9d022-c156-4c88-a796-2bc148714535" name="R_HMR_4398" reversible="true" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID:4989681;PMID:9226884</p> <p>ec-code: 4.1.2.4</p> <p>metanetx.reaction: MNXR97787</p> <p>kegg.reaction: R01066</p> <p>bigg.reaction: DRPA</p> <p>SUBSYSTEM: Pentose phosphate pathway</p> <p>EC_NUMBER: 4.1.2.4</p> <p>pmids: 4989681,9226884</p> <p>GENE_ASSOCIATION: ENSG00000023697</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#c2e9d022-c156-4c88-a796-2bc148714535"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/4.1.2.4"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR97787"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01066"/> <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/DRPA"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/9226884"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/4989681"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="ENSG00000023697"/> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m00640c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m01939c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01249c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4354" metaid="f7108fb4-b7e5-49a3-ada1-a6024a22b77c" name="R_HMR_4354" reversible="true" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID:14953458;PMID:3023765;PMID:5769188;PMID:8050998</p> <p>ec-code: 5.4.2.2 || 5.4.2.7</p> <p>metanetx.reaction: MNXR106810 || MNXR103115</p> <p>kegg.reaction: R01057</p> <p>bigg.reaction: PPM</p> <p>SUBSYSTEM: Pentose phosphate pathway</p> <p>EC_NUMBER: 5.4.2.2;5.4.2.7</p> <p>pmids: 3023765,5769188,8050998,14953458</p> <p>GENE_ASSOCIATION: ( ENSG00000079739 ) OR ( ENSG00000169299 )</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#f7108fb4-b7e5-49a3-ada1-a6024a22b77c"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/5.4.2.2"/> <rdf:li rdf:resource="https://identifiers.org/ec-code/5.4.2.7"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR106810"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR103115"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01057"/> <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/PPM"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/14953458"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/3023765"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/5769188"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/8050998"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="ENSG00000169299"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000079739"/> </fbc:or> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m02844c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m02845c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4310" metaid="_9239b4c7-a967-4956-b094-a7de9aff2cba" name="R_HMR_4310" reversible="false" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID:2996495;PMID:7833921</p> <p>ec-code: 2.7.1.3</p> <p>metanetx.reaction: MNXR100936</p> <p>kegg.reaction: R00866</p> <p>bigg.reaction: KHK</p> <p>SUBSYSTEM: Fructose and mannose metabolism</p> <p>EC_NUMBER: 2.7.1.3</p> <p>pmids: 2996495,7833921</p> <p>GENE_ASSOCIATION: ENSG00000138030</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_9239b4c7-a967-4956-b094-a7de9aff2cba"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.3"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR100936"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R00866"/> <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/KHK"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/2996495"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/7833921"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="ENSG00000138030"/> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01840c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m01842c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4476" metaid="_9560c25f-9d92-4a3c-bfbb-374877a611c3" name="R_HMR_4476" reversible="true" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID:10978316</p> <p>ec-code: 2.3.1.57</p> <p>metanetx.reaction: MNXR100390</p> <p>kegg.reaction: R01737</p> <p>SUBSYSTEM: Pentose phosphate pathway</p> <p>EC_NUMBER: 2.3.1.57</p> <p>pmids: 10978316</p> <p>GENE_ASSOCIATION: ( ENSG00000130066 ) OR ( ENSG00000141504 )</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_9560c25f-9d92-4a3c-bfbb-374877a611c3"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/2.3.1.57"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR100390"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01737"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/10978316"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="ENSG00000141504"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000130066"/> </fbc:or> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m01169c" stoichiometry="1"/> <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01683c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4399" metaid="_961e9144-e77b-430b-8dd8-8001acf778ea" name="R_HMR_4399" reversible="false" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID:9893952</p> <p>ec-code: 4.2.1.47</p> <p>metanetx.reaction: MNXR100377</p> <p>kegg.reaction: R00888</p> <p>bigg.reaction: GMAND</p> <p>SUBSYSTEM: Fructose and mannose metabolism</p> <p>EC_NUMBER: 4.2.1.47</p> <p>pmids: 9893952</p> <p>GENE_ASSOCIATION: ENSG00000112699</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_961e9144-e77b-430b-8dd8-8001acf778ea"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/4.2.1.47"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR100377"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R00888"/> <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/GMAND"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/9893952"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:geneProductRef fbc:geneProduct="ENSG00000112699"/> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m01951c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m02040c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01949c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4477" metaid="_44d922a9-9c8a-409b-b662-408d43f39b21" name="R_HMR_4477" reversible="true" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID:15234337;PMID:234468;PMID:2843500</p> <p>ec-code: 5.1.3.1</p> <p>metanetx.reaction: MNXR104083</p> <p>kegg.reaction: R01529</p> <p>bigg.reaction: RPE</p> <p>SUBSYSTEM: Pentose phosphate pathway</p> <p>EC_NUMBER: 5.1.3.1</p> <p>pmids: 234468,2843500,15234337</p> <p>GENE_ASSOCIATION: ( ENSG00000197713 ) OR ( ENSG00000235376 )</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#_44d922a9-9c8a-409b-b662-408d43f39b21"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/5.1.3.1"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR104083"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01529"/> <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/RPE"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/234468"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/2843500"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/15234337"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="ENSG00000197713"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000235376"/> </fbc:or> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m01761c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m02846c" stoichiometry="1"/> </listOfProducts> </reaction> <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4356" metaid="e6efa094-5aeb-412c-8390-f6707d0794e0" name="R_HMR_4356" reversible="false" sboTerm="SBO:0000176"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>Confidence Level: 0</p> <p>AUTHORS: PMID:5114731;PMID:5655259;PMID:6054986</p> <p>ec-code: 4.1.2.13</p> <p>metanetx.reaction: MNXR99460</p> <p>kegg.reaction: R02568</p> <p>bigg.reaction: FBA2</p> <p>SUBSYSTEM: Fructose and mannose metabolism</p> <p>EC_NUMBER: 4.1.2.13</p> <p>pmids: 5114731,5655259,6054986</p> <p>GENE_ASSOCIATION: ( ENSG00000109107 ) OR ( ENSG00000136872 ) OR ( ENSG00000149925 ) OR ( ENSG00000285043 )</p> </body> </notes> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> <rdf:Description rdf:about="#e6efa094-5aeb-412c-8390-f6707d0794e0"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/ec-code/4.1.2.13"/> <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR99460"/> <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R02568"/> <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/FBA2"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="https://identifiers.org/pubmed/5114731"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/6054986"/> <rdf:li rdf:resource="https://identifiers.org/pubmed/5655259"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <fbc:geneProductAssociation> <fbc:or> <fbc:geneProductRef fbc:geneProduct="ENSG00000136872"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000149925"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000109107"/> <fbc:geneProductRef fbc:geneProduct="ENSG00000285043"/> </fbc:or> </fbc:geneProductAssociation> <listOfReactants> <speciesReference constant="true" species="M_m01690c" stoichiometry="1"/> <speciesReference constant="true" species="M_m01981c" stoichiometry="1"/> </listOfReactants> <listOfProducts> <speciesReference constant="true" species="M_m01842c" stoichiometry="1"/> </listOfProducts> </reaction> </listOfReactions> </model> </sbml>