<?xml version="1.0" encoding="UTF-8" standalone="no"?>
<tool id="met4j_ChokePoint" name="ChokePoint" version="@TOOL_VERSION@">
  <description>Compute the Choke points of a metabolic network.</description>
  <macros>
    <import>macros.xml</import>
  </macros>
  <expand macro="bio_tools"/>
  <expand macro="requirements"/>
  <command detect_errors="exit_code"><![CDATA[met4j networkAnalysis.ChokePoint -i "$inputPath"
 -o "$outputPath"
]]></command>
  <inputs>
    <param argument="-i" format="sbml" label="input SBML file" name="inputPath" optional="false" type="data" value=""/>
  </inputs>
  <outputs>
    <data format="tsv" name="outputPath"/>
  </outputs>
  <tests/>
  <help><![CDATA[Compute the Choke points of a metabolic network.
Choke points are reactions that are required to consume or produce one compound. Targeting of choke point can lead to the accumulation or the loss of some metabolites, thus choke points constitute an indicator of lethality and can help identifying drug target.
@ATTRIBUTION@]]></help>
  <citations>
    <citation type="doi">10.1093/bioinformatics/btl181</citation>
  </citations>
</tool>