Mercurial > repos > metexplore > met4j_extractsubreactionnetwork

comparison ExtractSubReactionNetwork.xml @ 1:58f9ab14dc60 draft

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planemo upload for repository https://forge.inrae.fr/metexplore/met4j-galaxy commit 6bb33ff0ff022029543e5e5ace7d16418715aa1c
author metexplore
date Mon, 25 Aug 2025 16:06:11 +0000
parents 3f15c2b87e8c
children 6acc432dc801
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0:3f15c2b87e8c 1:58f9ab14dc60
4 <macros> 4 <macros>
5 <import>macros.xml</import> 5 <import>macros.xml</import>
6 </macros> 6 </macros>
7 <expand macro="bio_tools"/> 7 <expand macro="bio_tools"/>
8 <expand macro="requirements"/> 8 <expand macro="requirements"/>
9 <command detect_errors="exit_code"><![CDATA[met4j fr.inrae.toulouse.metexplore.met4j_toolbox.networkAnalysis.ExtractSubReactionNetwork -i "$inputPath" 9 <command detect_errors="exit_code"><![CDATA[met4j networkAnalysis.ExtractSubReactionNetwork -i "$inputPath"
10 -s "$sourcePath" 10 -s "$sourcePath"
11 $undirected 11 $undirected
12 -t "$targetPath" 12 -t "$targetPath"
13 -sc "$sideCompoundFile" 13 -sc "$sideCompoundFile"
14 #if str($rExclude) != 'None': 14 #if str($rExclude) != 'None':