Mercurial > repos > metexplore > met4j_sbml2tab

comparison Sbml2Tab.xml @ 3:afc9b623aa3e draft default tip

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planemo upload for repository https://forge.inrae.fr/metexplore/met4j-galaxy commit e757d0398a8407d983f1ef3f900b31cafc26e170
author metexplore
date Wed, 21 Jan 2026 15:31:53 +0000
parents be58dd7c74ee
children
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2:a415371c5b2c 3:afc9b623aa3e
29 <param argument="-i" format="sbml" label="Sbml file" name="in" optional="false" type="data" value=""/> 29 <param argument="-i" format="sbml" label="Sbml file" name="in" optional="false" type="data" value=""/>
30 </inputs> 30 </inputs>
31 <outputs> 31 <outputs>
32 <data format="tsv" name="out"/> 32 <data format="tsv" name="out"/>
33 </outputs> 33 </outputs>
34 <tests> 34 <tests/>
35 <test>
36 <param name="in" value="toy_model.xml"/>
37 <output ftype="tsv" name="out">
38 <assert_contents>
39 <has_n_lines n="8"/>
40 <has_n_columns n="9"/>
41 <has_text text="2.0 E[c] --&gt; D[c]"/>
42 <has_text text="A[c] &lt;==&gt; B[c]"/>
43 </assert_contents>
44 </output>
45 </test>
46 <test>
47 <param name="in" value="toy_model.xml"/>
48 <param name="i" value="-&gt;"/>
49 <param name="r" value="="/>
50 <output ftype="tsv" name="out">
51 <assert_contents>
52 <has_n_lines n="8"/>
53 <has_n_columns n="9"/>
54 <has_text text="2.0 E[c] -&gt; D[c]"/>
55 <has_text text="A[c] = B[c]"/>
56 </assert_contents>
57 </output>
58 </test>
59 </tests>
60 <help><![CDATA[Create a tabulated file listing reaction attributes from a SBML file 35 <help><![CDATA[Create a tabulated file listing reaction attributes from a SBML file
61 @ATTRIBUTION@]]></help> 36 @ATTRIBUTION@]]></help>
62 <citations/> 37 <citations/>
63 </tool> 38 </tool>