# HG changeset patch
# User mgarnier
# Date 1625489578 0
# Node ID ccb38fd085b2dc3638cc6898bdc9847e39c38b2a
# Parent  ede0f548b6ecdd541dd765faff5660393d9ec86e
Uploaded

diff -r ede0f548b6ec -r ccb38fd085b2 pangenomeCogAnalysis_V1.pl
--- a/pangenomeCogAnalysis_V1.pl	Fri Jul 02 19:57:16 2021 +0000
+++ b/pangenomeCogAnalysis_V1.pl	Mon Jul 05 12:52:58 2021 +0000
@@ -496,7 +496,7 @@
 
 
 
-        if ($type && $type eq "mRNA" && $gene_name =~ /ID=([^;]+);/){
+        if ($type && ($type eq "mRNA" or $type eq "CDS") && $gene_name =~ /ID=([^;]+);/){
             my $gene = $1;
             # print $gene."\n";
             # exit;