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comparison test-data/fsd_output1.tab @ 43:f72593bcc8ee draft

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planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd commit 033dd7b750f68e8aa68f327d7d72bd311ddbee4e-dirty
author mheinzl
date Wed, 14 Aug 2019 12:38:15 -0400
parents c825a29a7d9f
children 6651e76baca1
comparison
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42:321a4871564b 43:f72593bcc8ee
53 Dataset: fsd_data1.tab 53 Dataset: fsd_data1.tab
54 max. family size: 21 54 max. family size: 21
55 absolute frequency: 1 55 absolute frequency: 1
56 relative frequency: 0.009 56 relative frequency: 0.009
57 57
58 median family size: 1.0
59 mean family size: 3.375
60
58 singletons: family size > 20: length of dataset: 61 singletons: family size > 20: length of dataset:
59 nr. of tags rel. freq of tags rel.freq of PE reads nr. of tags rel. freq of tags nr. of PE reads rel. freq of PE reads total nr. of tags total nr. of PE reads 62 nr. of tags rel. freq of tags rel.freq of PE reads nr. of tags rel. freq of tags nr. of PE reads rel. freq of PE reads total nr. of tags total nr. of PE reads
60 fsd_data1.tab 63 0.562 0.167 1 0.009 21 0.056 112 378 63 fsd_data1.tab 63 0.562 0.167 1 0.009 21 0.056 112 378
61 64
62 The unique frequencies were calculated from the dataset where the tags occured only once (=ab without DCS, ba without DCS) 65 The unique frequencies were calculated from the dataset where the tags occured only once (=ab without DCS, ba without DCS)
103 Dataset: fsd_data2.tab 106 Dataset: fsd_data2.tab
104 max. family size: 21 107 max. family size: 21
105 absolute frequency: 1 108 absolute frequency: 1
106 relative frequency: 0.009 109 relative frequency: 0.009
107 110
111 median family size: 1.0
112 mean family size: 3.375
113
108 singletons: family size > 20: length of dataset: 114 singletons: family size > 20: length of dataset:
109 nr. of tags rel. freq of tags rel.freq of PE reads nr. of tags rel. freq of tags nr. of PE reads rel. freq of PE reads total nr. of tags total nr. of PE reads 115 nr. of tags rel. freq of tags rel.freq of PE reads nr. of tags rel. freq of tags nr. of PE reads rel. freq of PE reads total nr. of tags total nr. of PE reads
110 fsd_data2.tab 63 0.562 0.167 1 0.009 21 0.056 112 378 116 fsd_data2.tab 63 0.562 0.167 1 0.009 21 0.056 112 378
111 117
112 The unique frequencies were calculated from the dataset where the tags occured only once (=ab without DCS, ba without DCS) 118 The unique frequencies were calculated from the dataset where the tags occured only once (=ab without DCS, ba without DCS)
153 Dataset: fsd_data3.tab 159 Dataset: fsd_data3.tab
154 max. family size: 21 160 max. family size: 21
155 absolute frequency: 1 161 absolute frequency: 1
156 relative frequency: 0.009 162 relative frequency: 0.009
157 163
164 median family size: 1.0
165 mean family size: 3.375
166
158 singletons: family size > 20: length of dataset: 167 singletons: family size > 20: length of dataset:
159 nr. of tags rel. freq of tags rel.freq of PE reads nr. of tags rel. freq of tags nr. of PE reads rel. freq of PE reads total nr. of tags total nr. of PE reads 168 nr. of tags rel. freq of tags rel.freq of PE reads nr. of tags rel. freq of tags nr. of PE reads rel. freq of PE reads total nr. of tags total nr. of PE reads
160 fsd_data3.tab 63 0.562 0.167 1 0.009 21 0.056 112 378 169 fsd_data3.tab 63 0.562 0.167 1 0.009 21 0.056 112 378
161 170
162 The unique frequencies were calculated from the dataset where the tags occured only once (=ab without DCS, ba without DCS) 171 The unique frequencies were calculated from the dataset where the tags occured only once (=ab without DCS, ba without DCS)
203 Dataset: fsd_data4.tab 212 Dataset: fsd_data4.tab
204 max. family size: 21 213 max. family size: 21
205 absolute frequency: 1 214 absolute frequency: 1
206 relative frequency: 0.009 215 relative frequency: 0.009
207 216
217 median family size: 1.0
218 mean family size: 3.375
219
208 singletons: family size > 20: length of dataset: 220 singletons: family size > 20: length of dataset:
209 nr. of tags rel. freq of tags rel.freq of PE reads nr. of tags rel. freq of tags nr. of PE reads rel. freq of PE reads total nr. of tags total nr. of PE reads 221 nr. of tags rel. freq of tags rel.freq of PE reads nr. of tags rel. freq of tags nr. of PE reads rel. freq of PE reads total nr. of tags total nr. of PE reads
210 fsd_data4.tab 63 0.562 0.167 1 0.009 21 0.056 112 378 222 fsd_data4.tab 63 0.562 0.167 1 0.009 21 0.056 112 378
211 223
212 The unique frequencies were calculated from the dataset where the tags occured only once (=ab without DCS, ba without DCS) 224 The unique frequencies were calculated from the dataset where the tags occured only once (=ab without DCS, ba without DCS)