Mercurial > repos > mheinzl > fsd
diff test-data/fsd_output2.tab @ 45:6651e76baca1 draft
planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd commit 033dd7b750f68e8aa68f327d7d72bd311ddbee4e-dirty
| author | mheinzl |
|---|---|
| date | Tue, 27 Aug 2019 07:36:53 -0400 |
| parents | f72593bcc8ee |
| children | e51fe3083b16 |
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--- a/test-data/fsd_output2.tab Wed Aug 14 13:03:14 2019 -0400 +++ b/test-data/fsd_output2.tab Tue Aug 27 07:36:53 2019 -0400 @@ -1,4 +1,4 @@ -Values from family size distribution with all datasets (tags) +Values from family size distribution with all datasets based on families Family size fsd_data1.tab fsd_data2.tab fsd_data3.tab FS=1 63 63 63 @@ -24,7 +24,7 @@ FS>20 1 1 1 sum 112 112 112 -Values from family size distribution with all datasets (PE reads) +Values from family size distribution with all datasets based on PE reads Family size fsd_data1.tab fsd_data2.tab fsd_data3.tab FS=1 63 63 63 @@ -79,7 +79,7 @@ DCS (total) 1 (2) 4 (14) 0.024 0.024 (0.048) 0.014 0.014 (0.049) total nr. of tags 41 278 41 42 278 288 -Values from family size distribution +Values from family size distribution based on families duplex ab ba sum FS=1 2 30 31 63 FS=2 0 3 2 5 @@ -102,6 +102,32 @@ FS=19 0 0 0 0 FS=20 0 0 0 0 FS>20 0 0 1 1 +sum 6 47 59 112 + +Values from family size distribution based on PE reads + duplex ab ba sum +FS=1 2 30 31 63 +FS=2 0 6 4 10 +FS=3 0 9 15 24 +FS=4 8 12 16 36 +FS=5 0 10 5 15 +FS=6 0 6 24 30 +FS=7 0 7 14 21 +FS=8 0 8 16 24 +FS=9 0 0 18 18 +FS=10 10 10 10 30 +FS=11 0 0 11 11 +FS=12 0 12 24 36 +FS=13 13 13 13 39 +FS=14 0 0 0 0 +FS=15 0 0 0 0 +FS=16 0 0 0 0 +FS=17 0 0 0 0 +FS=18 0 0 0 0 +FS=19 0 0 0 0 +FS=20 0 0 0 0 +FS>20 0 0 21 21 +sum 33 123 222 378 Dataset: fsd_data2.tab max. family size: 21 @@ -132,7 +158,7 @@ DCS (total) 1 (2) 4 (14) 0.024 0.024 (0.048) 0.014 0.014 (0.049) total nr. of tags 41 278 41 42 278 288 -Values from family size distribution +Values from family size distribution based on families duplex ab ba sum FS=1 2 30 31 63 FS=2 0 3 2 5 @@ -155,6 +181,32 @@ FS=19 0 0 0 0 FS=20 0 0 0 0 FS>20 0 0 1 1 +sum 6 47 59 112 + +Values from family size distribution based on PE reads + duplex ab ba sum +FS=1 2 30 31 63 +FS=2 0 6 4 10 +FS=3 0 9 15 24 +FS=4 8 12 16 36 +FS=5 0 10 5 15 +FS=6 0 6 24 30 +FS=7 0 7 14 21 +FS=8 0 8 16 24 +FS=9 0 0 18 18 +FS=10 10 10 10 30 +FS=11 0 0 11 11 +FS=12 0 12 24 36 +FS=13 13 13 13 39 +FS=14 0 0 0 0 +FS=15 0 0 0 0 +FS=16 0 0 0 0 +FS=17 0 0 0 0 +FS=18 0 0 0 0 +FS=19 0 0 0 0 +FS=20 0 0 0 0 +FS>20 0 0 21 21 +sum 33 123 222 378 Dataset: fsd_data3.tab max. family size: 21 @@ -185,7 +237,7 @@ DCS (total) 1 (2) 4 (14) 0.024 0.024 (0.048) 0.014 0.014 (0.049) total nr. of tags 41 278 41 42 278 288 -Values from family size distribution +Values from family size distribution based on families duplex ab ba sum FS=1 2 30 31 63 FS=2 0 3 2 5 @@ -208,3 +260,29 @@ FS=19 0 0 0 0 FS=20 0 0 0 0 FS>20 0 0 1 1 +sum 6 47 59 112 + +Values from family size distribution based on PE reads + duplex ab ba sum +FS=1 2 30 31 63 +FS=2 0 6 4 10 +FS=3 0 9 15 24 +FS=4 8 12 16 36 +FS=5 0 10 5 15 +FS=6 0 6 24 30 +FS=7 0 7 14 21 +FS=8 0 8 16 24 +FS=9 0 0 18 18 +FS=10 10 10 10 30 +FS=11 0 0 11 11 +FS=12 0 12 24 36 +FS=13 13 13 13 39 +FS=14 0 0 0 0 +FS=15 0 0 0 0 +FS=16 0 0 0 0 +FS=17 0 0 0 0 +FS=18 0 0 0 0 +FS=19 0 0 0 0 +FS=20 0 0 0 0 +FS>20 0 0 21 21 +sum 33 123 222 378