Mercurial > repos > mheinzl > fsd_regions

annotate test-data/fsd_reg_output.tab @ 9:eabfdc012d7b draft

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planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd_regions commit 31f11c1cb3303d741ee11a25903c3cc42a23f30d
author mheinzl
date Mon, 26 Nov 2018 04:25:26 -0500
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children 6879295d3f11
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9
eabfdc012d7b planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd_regions commit 31f11c1cb3303d741ee11a25903c3cc42a23f30d
mheinzl
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1 Dataset: Tags_fsd_reg.tab
eabfdc012d7b planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd_regions commit 31f11c1cb3303d741ee11a25903c3cc42a23f30d
mheinzl
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2 AB BA
eabfdc012d7b planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd_regions commit 31f11c1cb3303d741ee11a25903c3cc42a23f30d
mheinzl
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3 max. family size: 11 35
eabfdc012d7b planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd_regions commit 31f11c1cb3303d741ee11a25903c3cc42a23f30d
mheinzl
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4 absolute frequency: 22 2
eabfdc012d7b planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd_regions commit 31f11c1cb3303d741ee11a25903c3cc42a23f30d
mheinzl
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5 relative frequency: 0.333 0.167
eabfdc012d7b planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd_regions commit 31f11c1cb3303d741ee11a25903c3cc42a23f30d
mheinzl
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6
eabfdc012d7b planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd_regions commit 31f11c1cb3303d741ee11a25903c3cc42a23f30d
mheinzl
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7 total nr. of reads 1312
eabfdc012d7b planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd_regions commit 31f11c1cb3303d741ee11a25903c3cc42a23f30d
mheinzl
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8 total nr. of tags 24 (12)
eabfdc012d7b planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd_regions commit 31f11c1cb3303d741ee11a25903c3cc42a23f30d
mheinzl
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9
eabfdc012d7b planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd_regions commit 31f11c1cb3303d741ee11a25903c3cc42a23f30d
mheinzl
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10
eabfdc012d7b planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd_regions commit 31f11c1cb3303d741ee11a25903c3cc42a23f30d
mheinzl
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11 Values from family size distribution
eabfdc012d7b planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd_regions commit 31f11c1cb3303d741ee11a25903c3cc42a23f30d
mheinzl
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12 ACH_TDII_5regions_90_633 ACH_TDII_5regions_659_1140
eabfdc012d7b planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd_regions commit 31f11c1cb3303d741ee11a25903c3cc42a23f30d
mheinzl
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13 FS=4 4 0
eabfdc012d7b planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd_regions commit 31f11c1cb3303d741ee11a25903c3cc42a23f30d
mheinzl
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14 FS=5 4 0
eabfdc012d7b planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd_regions commit 31f11c1cb3303d741ee11a25903c3cc42a23f30d
mheinzl
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15 FS=6 0 0
eabfdc012d7b planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd_regions commit 31f11c1cb3303d741ee11a25903c3cc42a23f30d
mheinzl
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16 FS=7 6 0
eabfdc012d7b planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd_regions commit 31f11c1cb3303d741ee11a25903c3cc42a23f30d
mheinzl
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17 FS=8 0 0
eabfdc012d7b planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd_regions commit 31f11c1cb3303d741ee11a25903c3cc42a23f30d
mheinzl
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18 FS=9 2 0
eabfdc012d7b planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd_regions commit 31f11c1cb3303d741ee11a25903c3cc42a23f30d
mheinzl
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19 FS=10 4 0
eabfdc012d7b planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd_regions commit 31f11c1cb3303d741ee11a25903c3cc42a23f30d
mheinzl
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20 FS=11 0 2
eabfdc012d7b planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd_regions commit 31f11c1cb3303d741ee11a25903c3cc42a23f30d
mheinzl
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21 FS=12 0 0
eabfdc012d7b planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd_regions commit 31f11c1cb3303d741ee11a25903c3cc42a23f30d
mheinzl
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22 FS=13 0 0
eabfdc012d7b planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd_regions commit 31f11c1cb3303d741ee11a25903c3cc42a23f30d
mheinzl
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23 FS=14 0 0
eabfdc012d7b planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd_regions commit 31f11c1cb3303d741ee11a25903c3cc42a23f30d
mheinzl
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24 FS=15 0 0
eabfdc012d7b planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd_regions commit 31f11c1cb3303d741ee11a25903c3cc42a23f30d
mheinzl
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25 FS=16 0 0
eabfdc012d7b planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd_regions commit 31f11c1cb3303d741ee11a25903c3cc42a23f30d
mheinzl
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26 FS=17 0 0
eabfdc012d7b planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd_regions commit 31f11c1cb3303d741ee11a25903c3cc42a23f30d
mheinzl
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27 FS=18 0 0
eabfdc012d7b planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd_regions commit 31f11c1cb3303d741ee11a25903c3cc42a23f30d
mheinzl
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28 FS=19 0 0
eabfdc012d7b planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd_regions commit 31f11c1cb3303d741ee11a25903c3cc42a23f30d
mheinzl
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29 FS=20 0 0
eabfdc012d7b planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd_regions commit 31f11c1cb3303d741ee11a25903c3cc42a23f30d
mheinzl
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30 FS>20 0 2
eabfdc012d7b planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd_regions commit 31f11c1cb3303d741ee11a25903c3cc42a23f30d
mheinzl
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31 sum 20 4
eabfdc012d7b planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd_regions commit 31f11c1cb3303d741ee11a25903c3cc42a23f30d
mheinzl
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32
eabfdc012d7b planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd_regions commit 31f11c1cb3303d741ee11a25903c3cc42a23f30d
mheinzl
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33
eabfdc012d7b planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd_regions commit 31f11c1cb3303d741ee11a25903c3cc42a23f30d
mheinzl
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34 In the plot, both family sizes of the ab and ba strands were used.
eabfdc012d7b planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd_regions commit 31f11c1cb3303d741ee11a25903c3cc42a23f30d
mheinzl
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35 Whereas the total numbers indicate only the single count of the tags per region.
eabfdc012d7b planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd_regions commit 31f11c1cb3303d741ee11a25903c3cc42a23f30d
mheinzl
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36 Region total nr. of tags per region
eabfdc012d7b planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd_regions commit 31f11c1cb3303d741ee11a25903c3cc42a23f30d
mheinzl
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37 ACH_TDII_5regions_90_633 10
eabfdc012d7b planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd_regions commit 31f11c1cb3303d741ee11a25903c3cc42a23f30d
mheinzl
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38 ACH_TDII_5regions_659_1140 2