Mercurial > repos > mheinzl > fsd_regions

comparison test-data/output_file.tabular @ 4:b202c97deabe draft

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planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd_regions commit dfaab79252a858e8df16bbea3607ebf1b6962e5a
author mheinzl
date Mon, 08 Oct 2018 05:53:50 -0400
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children 26014c24323a
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3:85d870b8ae92 4:b202c97deabe
1 Dataset: Test_data
2 AB BA
3 max. family size: 85 332
4 absolute frequency: 9 1
5 relative frequency: 0.209 0.062
6
7 total nr. of reads 1312
8
9
10 Values from family size distribution
11 87_636 656_1143 1141_1564 1892_2398
12 FS=3 0 0 0 1
13 FS=4 2 0 0 0
14 FS=5 2 0 0 0
15 FS=6 0 1 0 0
16 FS=7 3 0 0 2
17 FS=8 0 0 0 1
18 FS=9 1 0 0 2
19 FS=10 2 0 0 0
20 FS=11 0 1 1 0
21 FS=12 0 0 0 0
22 FS=13 0 0 0 0
23 FS=14 0 0 0 0
24 FS=15 0 0 1 0
25 FS=16 0 0 0 0
26 FS=17 0 0 0 0
27 FS=18 0 0 0 0
28 FS=19 0 0 0 0
29 FS=20 0 0 0 0
30 FS>20 0 8 4 0
31 sum 10 10 6 6
32
33
34 In the plot, both family sizes of the ab and ba strands were used.
35 Whereas the total numbers indicate only the single count of the tags per region.
36 Region total nr. of tags per region
37 87_636 5
38 656_1143 5
39 1141_1564 3
40 1892_2398 3
41 sum of tags 16