Mercurial > repos > mheinzl > fsd_regions
diff test-data/fsd_reg_output.tab @ 9:eabfdc012d7b draft
planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd_regions commit 31f11c1cb3303d741ee11a25903c3cc42a23f30d
author | mheinzl |
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date | Mon, 26 Nov 2018 04:25:26 -0500 |
parents | |
children | 6879295d3f11 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/fsd_reg_output.tab Mon Nov 26 04:25:26 2018 -0500 @@ -0,0 +1,38 @@ +Dataset: Tags_fsd_reg.tab + AB BA +max. family size: 11 35 +absolute frequency: 22 2 +relative frequency: 0.333 0.167 + +total nr. of reads 1312 +total nr. of tags 24 (12) + + +Values from family size distribution + ACH_TDII_5regions_90_633 ACH_TDII_5regions_659_1140 +FS=4 4 0 +FS=5 4 0 +FS=6 0 0 +FS=7 6 0 +FS=8 0 0 +FS=9 2 0 +FS=10 4 0 +FS=11 0 2 +FS=12 0 0 +FS=13 0 0 +FS=14 0 0 +FS=15 0 0 +FS=16 0 0 +FS=17 0 0 +FS=18 0 0 +FS=19 0 0 +FS=20 0 0 +FS>20 0 2 +sum 20 4 + + +In the plot, both family sizes of the ab and ba strands were used. +Whereas the total numbers indicate only the single count of the tags per region. +Region total nr. of tags per region +ACH_TDII_5regions_90_633 10 +ACH_TDII_5regions_659_1140 2