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comparison test-data/hd_chimeras_output.tab @ 25:9e384b0741f1 draft

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planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/hd commit b8a2f7b7615b2bcd3b602027af31f4e677da94f6-dirty
author mheinzl
date Tue, 14 May 2019 03:29:37 -0400
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children 6b15b3b6405c
comparison
equal deleted inserted replaced
24:3bc67ac46740 25:9e384b0741f1
1 chimera tag similar tag with HD=0
2 AAAAAAAAAAAA AACCAAAACTTC *AAAAAAAAAAAA* TCTTTCTTTGAG
3 AAAAAAAAAAAA ACCAGGCGTCGA *AAAAAAAAAAAA* AACCAAAACTTC, *AAAAAAAAAAAA* AGCTCCACGTTG, *AAAAAAAAAAAA* CAGTGTTGAGAC, *AAAAAAAAAAAA* TCTTTCTTTGAG, *AAAAAAAAAAAA* TTGGGTTCCTTA
4 AAAAAAAAAAAA AGCTCCACGTTG *AAAAAAAAAAAA* CAGTGTTGAGAC, *AAAAAAAAAAAA* CCGCTCCTCACA
5 AAAAAAAAAAAA ATCGTGGTTTGT *AAAAAAAAAAAA* CAGTGTTGAGAC, AAAAAAAAAAAG *ATCGTGGTTTGT*
6 AAAAAAAAAAAA ATTCACCCTTGT *AAAAAAAAAAAA* CAGTGTTGAGAC, AAAAAAAAAAAT *ATTCACCCTTGT*
7 AAAAAAAAAAAA CACACTTAACTT *AAAAAAAAAAAA* ATTCACCCTTGT, *AAAAAAAAAAAA* CCGCTCCTCACA, *AAAAAAAAAAAA* TCTTTCTTTGAG
8 AAAAAAAAAAAA CAGTGTTGAGAC *AAAAAAAAAAAA* ATCGTGGTTTGT, *AAAAAAAAAAAA* ATTCACCCTTGT, *AAAAAAAAAAAA* CACACTTAACTT
9 AAAAAAAAAAAA CCGCTCCTCACA *AAAAAAAAAAAA* AGCTCCACGTTG, *AAAAAAAAAAAA* CACACTTAACTT
10 AAAAAAAAAAAA GGCAACACAGAA *AAAAAAAAAAAA* ATCGTGGTTTGT, AAAAAAAAAAAG *GGCAACACAGAA*
11 AAAAAAAAAAAA TCTTTCTTTGAG *AAAAAAAAAAAA* AACCAAAACTTC, AAAAAAAAAAAG *TCTTTCTTTGAG*
12 AAAAAAAAAAAA TTGGGTTCCTTA *AAAAAAAAAAAA* ACCAGGCGTCGA, *AAAAAAAAAAAA* GGCAACACAGAA, *AAAAAAAAAAAA* TCTTTCTTTGAG
13 AAAAAAAAAAAG AGTCGCACCCAG *AAAAAAAAAAAG* ATCGTGGTTTGT
14 AAAAAAAAAAAG ATCGTGGTTTGT AAAAAAAAAAAA *ATCGTGGTTTGT*, *AAAAAAAAAAAG* TAGCCCTAAACG
15 AAAAAAAAAAAG CGCAACACAGAA *AAAAAAAAAAAG* ATCGTGGTTTGT
16 AAAAAAAAAAAG GGCAACACAGAA AAAAAAAAAAAA *GGCAACACAGAA*, *AAAAAAAAAAAG* ATCGTGGTTTGT
17 AAAAAAAAAAAG TAGCCCTAAACG *AAAAAAAAAAAG* ATCGTGGTTTGT
18 AAAAAAAAAAAG TCTTTCTTTGAG AAAAAAAAAAAA *TCTTTCTTTGAG*, *AAAAAAAAAAAG* ATCGTGGTTTGT, *AAAAAAAAAAAG* CGCAACACAGAA, *AAAAAAAAAAAG* GGCAACACAGAA
19 AAAAAAAAAAAT ATCATAGACTCT *AAAAAAAAAAAT* ATTCACCCTTGT
20 AAAAAAAAAAAT ATTCACCCTTGT AAAAAAAAAAAA *ATTCACCCTTGT*, *AAAAAAAAAAAT* ATCATAGACTCT
21 AAAAAAAAAAAT ATTCGAAAGTTA *AAAAAAAAAAAT* ATCATAGACTCT, *AAAAAAAAAAAT* ATTCACCCTTGT
22 This file contains all tags that were identified as chimeras as the first column and the corresponding tags which returned a Hamming distance of zero in either the first or the second half of the sample tag as the second column.
23 The tags were separated by an empty space into their halves and the * marks the identical half.