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view test-data/hd_chimeras_output.tab @ 26:15d5da04ef70 draft

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planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/hd commit b8a2f7b7615b2bcd3b602027af31f4e677da94f6-dirty
author mheinzl
date Tue, 14 May 2019 03:48:39 -0400
parents 9e384b0741f1
children 6b15b3b6405c
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chimera tag	similar tag with HD=0
AAAAAAAAAAAA AACCAAAACTTC	*AAAAAAAAAAAA* TCTTTCTTTGAG
AAAAAAAAAAAA ACCAGGCGTCGA	*AAAAAAAAAAAA* AACCAAAACTTC, *AAAAAAAAAAAA* AGCTCCACGTTG, *AAAAAAAAAAAA* CAGTGTTGAGAC, *AAAAAAAAAAAA* TCTTTCTTTGAG, *AAAAAAAAAAAA* TTGGGTTCCTTA
AAAAAAAAAAAA AGCTCCACGTTG	*AAAAAAAAAAAA* CAGTGTTGAGAC, *AAAAAAAAAAAA* CCGCTCCTCACA
AAAAAAAAAAAA ATCGTGGTTTGT	*AAAAAAAAAAAA* CAGTGTTGAGAC, AAAAAAAAAAAG *ATCGTGGTTTGT*
AAAAAAAAAAAA ATTCACCCTTGT	*AAAAAAAAAAAA* CAGTGTTGAGAC, AAAAAAAAAAAT *ATTCACCCTTGT*
AAAAAAAAAAAA CACACTTAACTT	*AAAAAAAAAAAA* ATTCACCCTTGT, *AAAAAAAAAAAA* CCGCTCCTCACA, *AAAAAAAAAAAA* TCTTTCTTTGAG
AAAAAAAAAAAA CAGTGTTGAGAC	*AAAAAAAAAAAA* ATCGTGGTTTGT, *AAAAAAAAAAAA* ATTCACCCTTGT, *AAAAAAAAAAAA* CACACTTAACTT
AAAAAAAAAAAA CCGCTCCTCACA	*AAAAAAAAAAAA* AGCTCCACGTTG, *AAAAAAAAAAAA* CACACTTAACTT
AAAAAAAAAAAA GGCAACACAGAA	*AAAAAAAAAAAA* ATCGTGGTTTGT, AAAAAAAAAAAG *GGCAACACAGAA*
AAAAAAAAAAAA TCTTTCTTTGAG	*AAAAAAAAAAAA* AACCAAAACTTC, AAAAAAAAAAAG *TCTTTCTTTGAG*
AAAAAAAAAAAA TTGGGTTCCTTA	*AAAAAAAAAAAA* ACCAGGCGTCGA, *AAAAAAAAAAAA* GGCAACACAGAA, *AAAAAAAAAAAA* TCTTTCTTTGAG
AAAAAAAAAAAG AGTCGCACCCAG	*AAAAAAAAAAAG* ATCGTGGTTTGT
AAAAAAAAAAAG ATCGTGGTTTGT	AAAAAAAAAAAA *ATCGTGGTTTGT*, *AAAAAAAAAAAG* TAGCCCTAAACG
AAAAAAAAAAAG CGCAACACAGAA	*AAAAAAAAAAAG* ATCGTGGTTTGT
AAAAAAAAAAAG GGCAACACAGAA	AAAAAAAAAAAA *GGCAACACAGAA*, *AAAAAAAAAAAG* ATCGTGGTTTGT
AAAAAAAAAAAG TAGCCCTAAACG	*AAAAAAAAAAAG* ATCGTGGTTTGT
AAAAAAAAAAAG TCTTTCTTTGAG	AAAAAAAAAAAA *TCTTTCTTTGAG*, *AAAAAAAAAAAG* ATCGTGGTTTGT, *AAAAAAAAAAAG* CGCAACACAGAA, *AAAAAAAAAAAG* GGCAACACAGAA
AAAAAAAAAAAT ATCATAGACTCT	*AAAAAAAAAAAT* ATTCACCCTTGT
AAAAAAAAAAAT ATTCACCCTTGT	AAAAAAAAAAAA *ATTCACCCTTGT*, *AAAAAAAAAAAT* ATCATAGACTCT
AAAAAAAAAAAT ATTCGAAAGTTA	*AAAAAAAAAAAT* ATCATAGACTCT, *AAAAAAAAAAAT* ATTCACCCTTGT
This file contains all tags that were identified as chimeras as the first column and the corresponding tags which returned a Hamming distance of zero in either the first or the second half of the sample tag as the second column.
 The tags were separated by an empty space into their halves and the * marks the identical half.