Mercurial > repos > mheinzl > variant_analyzer2

comparison read2mut.py @ 69:c44475567466 draft

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planemo upload for repository https://github.com/Single-Molecule-Genetics/VariantAnalyzerGalaxy/tree/master/tools/variant_analyzer commit ee4a8e6cf290e6c8a4d55f9cd2839d60ab3b11c8
author mheinzl
date Thu, 18 Mar 2021 11:09:51 +0000
parents 4dfed0998184
children eca1365eb42c
comparison
equal deleted inserted replaced
68:4dfed0998184 69:c44475567466
587 alt3ff = alt3f 587 alt3ff = alt3f
588 alt3ff_trim = alt3f 588 alt3ff_trim = alt3f
589 if total4new == 0: 589 if total4new == 0:
590 ref4f = alt4f = None 590 ref4f = alt4f = None
591 alt4ff = -1 591 alt4ff = -1
592 alt4ff_trim = alt4f 592 alt4ff_trim = -1
593 else: 593 else:
594 alt4ff = alt4f 594 alt4ff = alt4f
595 alt4ff_trim = alt4f 595 alt4ff_trim = alt4f
596 596
597 beg1 = beg4 = beg2 = beg3 = 0 597 beg1 = beg4 = beg2 = beg3 = 0