Mercurial > repos > mheinzl > variant_analyzer2
diff read2mut.py @ 81:612c110305db draft
planemo upload for repository https://github.com/Single-Molecule-Genetics/VariantAnalyzerGalaxy/tree/master/tools/variant_analyzer commit ee4a8e6cf290e6c8a4d55f9cd2839d60ab3b11c8-dirty
| author | mheinzl |
|---|---|
| date | Wed, 27 Jul 2022 07:08:10 +0000 |
| parents | 8336a4f2b647 |
| children | c2e8932b4d8d |
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--- a/read2mut.py Tue Jul 26 10:19:28 2022 +0000 +++ b/read2mut.py Wed Jul 27 07:08:10 2022 +0000 @@ -427,9 +427,9 @@ chimeric_tag = {} if (key1 in pure_tags_dict_short.keys()) or (key1 in pure_tags_dict_ref.keys()): # ref or alt - if key1 not in np.array(['#'.join(str(i) for i in z) - for z in zip(mut_array[:, 0], mut_array[:, 1], mut_array[:, 2], mut_array[:, 3])]): - continue + # if key1 not in np.array(['#'.join(str(i) for i in z) + # for z in zip(mut_array[:, 0], mut_array[:, 1], mut_array[:, 2], mut_array[:, 3])]): + # continue change_tier_after_print = [] i = np.where(np.array(['#'.join(str(i) for i in z)