Mercurial > repos > mheinzl > variant_analyzer2

diff read2mut.py @ 49:aa45100f5b14 draft

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planemo upload for repository https://github.com/Single-Molecule-Genetics/VariantAnalyzerGalaxy/tree/master/tools/variant_analyzer commit ee4a8e6cf290e6c8a4d55f9cd2839d60ab3b11c8
author mheinzl
date Wed, 10 Mar 2021 17:46:01 +0000
parents e2a655533077
children b32c973fe8ab
line wrap: on
line diff
--- a/read2mut.py	Wed Mar 10 14:37:20 2021 +0000
+++ b/read2mut.py	Wed Mar 10 17:46:01 2021 +0000
@@ -1051,7 +1051,7 @@
                                                 'format': format2,
                                                 'multi_range': 'L{}:M{} T{}:U{} B{}'.format(row + 1, row + 2, row + 1, row + 2, row + 1, row + 2)})
                         if trimmed:
-                            if key1 not in list(mut_read_pos_dict.keys()):
+                            if key1 not in list(change_tier_after_print.keys()):
                                 change_tier_after_print[key1] = [((row, line), (row, line2))]
                             else:
                                 change_tier_after_print[key1].append(((row, line), (row, line2)))