# HG changeset patch # User mheinzl # Date 1614006326 0 # Node ID ac07ff15dcfd1b9c1162b867ed8f32b49181a691 # Parent 858ca8b7ad43bf69ee12affa7c2c75add2a71672 planemo upload for repository https://github.com/Single-Molecule-Genetics/VariantAnalyzerGalaxy/tree/master/tools/variant_analyzer commit ee4a8e6cf290e6c8a4d55f9cd2839d60ab3b11c8 diff -r 858ca8b7ad43 -r ac07ff15dcfd read2mut.py --- a/read2mut.py Mon Feb 22 15:02:21 2021 +0000 +++ b/read2mut.py Mon Feb 22 15:05:26 2021 +0000 @@ -101,8 +101,10 @@ sys.exit("Error: thresh is '{}', but only non-negative integers allowed".format(thresh)) if phred_score < 0: sys.exit("Error: phred is '{}', but only non-negative integers allowed".format(phred_score)) - if trim < 0: - sys.exit("Error: trim is '{}', but only non-negative integers allowed".format(thresh)) + if trim5 < 0: + sys.exit("Error: trim5 is '{}', but only non-negative integers allowed".format(trim5)) + if trim3 < 0: + sys.exit("Error: trim3 is '{}', but only non-negative integers allowed".format(trim3)) # load dicts with open(json_file, "r") as f: