Mercurial > repos > mheinzl > variant_analyzer2

changeset 81:612c110305db draft

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planemo upload for repository https://github.com/Single-Molecule-Genetics/VariantAnalyzerGalaxy/tree/master/tools/variant_analyzer commit ee4a8e6cf290e6c8a4d55f9cd2839d60ab3b11c8-dirty
author mheinzl
date Wed, 27 Jul 2022 07:08:10 +0000
parents 8336a4f2b647
children c2e8932b4d8d
files read2mut.py
diffstat 1 files changed, 3 insertions(+), 3 deletions(-) [+]
line wrap: on
line diff
--- a/read2mut.py	Tue Jul 26 10:19:28 2022 +0000
+++ b/read2mut.py	Wed Jul 27 07:08:10 2022 +0000
@@ -427,9 +427,9 @@
         chimeric_tag = {}
         if (key1 in pure_tags_dict_short.keys()) or (key1 in pure_tags_dict_ref.keys()):  # ref or alt
 
-            if key1 not in np.array(['#'.join(str(i) for i in z)
-                                   for z in zip(mut_array[:, 0], mut_array[:, 1], mut_array[:, 2], mut_array[:, 3])]):
-                continue
+            # if key1 not in np.array(['#'.join(str(i) for i in z)
+            #                        for z in zip(mut_array[:, 0], mut_array[:, 1], mut_array[:, 2], mut_array[:, 3])]):
+            #     continue
 
             change_tier_after_print = []
             i = np.where(np.array(['#'.join(str(i) for i in z)