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comparison OPPL/README @ 3:5255f1333cc4

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Version 1.0.1 Added output choice: OBO or OWL(RDF/XML)
author Mikel Egaña Aranguren <mikel-egana-aranguren@toolshed.g2.bx.psu.edu>
date Wed, 07 Sep 2011 10:46:29 +0200
parents 46b9d13a44fc
children 4f60202c58d9
comparison
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2:0a374d0b7759 3:5255f1333cc4
28 6.- Start galaxy. 28 6.- Start galaxy.
29 29
30 Note that if you want you can use any java parameter by editing oppl.xml 30 Note that if you want you can use any java parameter by editing oppl.xml
31 , eg: <command>java -Xmx7000M -Xms250M -DentityExpansionLimit=1000000000 31 , eg: <command>java -Xmx7000M -Xms250M -DentityExpansionLimit=1000000000
32 -jar ${__tool_data_path__}/shared/jars/oppl_galaxy_tool.jar $input $OPPL 32 -jar ${__tool_data_path__}/shared/jars/oppl_galaxy_tool.jar $input $OPPL
33 > $output </command> 33 $format > $output </command>
34 34
35 35
36 36
37 USAGE 37 USAGE
38 ===== 38 =====