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comparison OPPL/README @ 15:622cde484f4c draft

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Add new tool to perform OPPL queries
author Mikel Egana Aranguren <mikel-egana-aranguren@toolshed.g2.bx.psu.edu>
date Thu, 12 Jul 2012 17:12:00 +0200
parents 7e6604a5ee55
children c9e01f86b07c
comparison
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14:68c4ae500a13 15:622cde484f4c
10 /galaxy-dist/tool-data/shared/jars/: 10 /galaxy-dist/tool-data/shared/jars/:
11 11
12 oppl_galaxy_tool.jar 12 oppl_galaxy_tool.jar
13 inference.jar 13 inference.jar
14 query.jar 14 query.jar
15 oppl_query.jar
15 oppl_galaxy_lib/ 16 oppl_galaxy_lib/
16 inference_lib/ 17 inference_lib/
17 query_lib/ 18 query_lib/
19 oppl_query_lib/
18 FaCT++-linux-v1.5.2/ 20 FaCT++-linux-v1.5.2/
19 FaCT++-OSX-v1.5.2/ 21 FaCT++-OSX-v1.5.2/
20 22
21 3.- Create directory /galaxy-dist/tools/OPPL/ 23 3.- Create directory /galaxy-dist/tools/OPPL/
22 24
27 29
28 <section name="Ontology Pre Processor Language" id="oppl"> 30 <section name="Ontology Pre Processor Language" id="oppl">
29 <tool file="OPPL/oppl.xml"/> 31 <tool file="OPPL/oppl.xml"/>
30 <tool file="OPPL/inference.xml"/> 32 <tool file="OPPL/inference.xml"/>
31 <tool file="OPPL/query.xml"/> 33 <tool file="OPPL/query.xml"/>
34 <tool file="OPPL/oppl_query.xml"/>
32 </section> 35 </section>
33 36
34 6.- Start Galaxy. 37 6.- Start Galaxy.
35 38
36 39
37 40
38 FORESEEN FEATURES 41 FORESEEN FEATURES
39 ================= 42 =================
40 43
41 General (OPPL, Inference, Query): 44 General (OPPL, Inference, Query, OPPL query):
42 45
43 - Support for processing ontologies that import other ontologies loaded 46 - Support for processing ontologies that import other ontologies loaded
44 in galaxy. 47 in galaxy.
45 48
46 - Entities rendering definition (URI fragment, rdfs:label, QName, etc). 49 - Entities rendering definition (URI fragment, rdfs:label, QName, etc).
58 61
59 Inference: 62 Inference:
60 63
61 - Support for DataPropertyAssertion, DataPropertyHierarchy, 64 - Support for DataPropertyAssertion, DataPropertyHierarchy,
62 DifferentIndividuals, ... 65 DifferentIndividuals, ...
66
67 OPPL query:
63 68
64 69
65 70
66 KNOWN BUGS AND ISSUES 71 KNOWN BUGS AND ISSUES
67 ===================== 72 =====================