diff README @ 22:8d4bbaa99b4a draft

Minor changes for JBS paper
author Mikel Egana Aranguren <mikel-egana-aranguren@toolshed.g2.bx.psu.edu>
date Sun, 14 Oct 2012 17:21:51 +0200
parents ffde1fafa066
children
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--- a/README	Mon Oct 08 13:10:44 2012 +0200
+++ b/README	Sun Oct 14 17:21:51 2012 +0200
@@ -32,7 +32,7 @@
 
 2.- Move to galaxy-dist/tools/oppl/
 
-3.- Pull changes adn update working copy: 
+3.- Pull changes and update working copy with mercurial: 
 
 hg pull
 hg update
@@ -41,7 +41,7 @@
 
 ./install.sh
 
-5.- Only edit /galaxy-dist/tool_conf.xml in case a tool (an XML file) has been added/removed.
+5.- Only edit galaxy-dist/tool_conf.xml in case a tool (an XML file) has been added/removed.
 
 6.- Start Galaxy.
 
@@ -55,7 +55,7 @@
 1.- Stop Galaxy.
 
 2.- Copy the following files and directories to
-/galaxy-dist/tool-data/shared/jars/:
+galaxy-dist/tool-data/shared/jars/:
 
 oppl_galaxy_tool.jar
 inference.jar
@@ -70,12 +70,12 @@
 FaCT++-linux-v1.5.2/ 
 FaCT++-OSX-v1.5.2/
  
-3.- Create directory /galaxy-dist/tools/oppl/
+3.- Create directory galaxy-dist/tools/oppl/
 
 4.- Copy oppl.xml, inference.xml, query.xml, oppl_query.xml and 
-merge.xml to /galaxy-dist/tools/oppl/
+merge.xml to galaxy-dist/tools/oppl/
 
-5.- Add the following lines to /galaxy-dist/tool_conf.xml:
+5.- Add the following lines to galaxy-dist/tool_conf.xml:
 
   <section name="Ontology Pre Processor Language" id="oppl">
     <tool file="oppl/oppl.xml"/>
@@ -107,6 +107,8 @@
 - Support for DataPropertyAssertion, DataPropertyHierarchy,
 DifferentIndividuals, ...
 
+- A new tool for wrapping the ontology modularisation function of the OWL API.
+
 
 
 KNOWN BUGS AND ISSUES