Mercurial > repos > mikel-egana-aranguren > sadi_docker

diff tools/SADI-Docker/SADI-Docker-SPARQLGalaxy.xml @ 0:54c48f9ca32b default tip

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first release
author Mikel Egana <mikel.egana.aranguren@gmail.com>
date Fri, 04 Sep 2015 23:24:45 +0200
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tools/SADI-Docker/SADI-Docker-SPARQLGalaxy.xml	Fri Sep 04 23:24:45 2015 +0200
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+<tool id="SADI-Docker-SPARQLGalaxy" name="SADI - Execute an SPARQL query against an RDF file" version="0.1">
+	<description>It executes an SPARQL query against the input RDF file and generates an HTML file with the variables and bound entities</description>
+	  	<requirements>
+	  <container type="docker">mikeleganaaranguren/sadi:v6</container>
+	</requirements>
+	<command>
+	   python /sadi/sparql.py $ontology "$pasted_query" $out_format > $output 2>/dev/null
+	</command>
+	<inputs>
+		<param name="ontology" type="data" format="rdf" label="Input RDF file"/>		   
+		<param name="pasted_query" type="text" area="True" size="10x50" label="SPARQL Query" value="SELECT * WHERE { ?s ?p ?o }">
+		  <sanitizer sanitize="False"/>
+		</param>	
+		<param name="out_format" type="select" label="Output format" help="">
+			<option value="html" selected="true">HTML</option>
+			<option value="tab">TABULAR</option>
+		</param>
+
+	</inputs>
+	<outputs>
+		<data format="html" name="output">
+		<change_format>
+			<when input="out_format" value="tab" format="tabular" />
+		 </change_format>
+		 </data>
+	</outputs>
+	<help>
+	  
+**Usage**
+
+  An RDF file (in any format that RDFLib can accept) and a SPARQL query are needed.
+
+**About**
+	  
+  More information and contact: http://github.com/mikel-egana-aranguren/SADI-Docker-Galaxy.
+
+	</help>
+
+</tool>