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comparison README @ 1:bb17b69a74c5 draft

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RDF syntax converter added
author Mikel Egana Aranguren <mikel-egana-aranguren@toolshed.g2.bx.psu.edu>
date Thu, 05 Dec 2013 11:45:24 +0100
parents 930ab9823773
children
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0:930ab9823773 1:bb17b69a74c5
2 ===== 2 =====
3 3
4 This is a client for SADI services. A SADI service consumes and ouputs 4 This is a client for SADI services. A SADI service consumes and ouputs
5 RDF. Therefore, if you provide the service URI and a correct RDF input, 5 RDF. Therefore, if you provide the service URI and a correct RDF input,
6 this client will infer if the RDF is really compliant with the service 6 this client will infer if the RDF is really compliant with the service
7 and submit it, obtaining the output RDF. 7 and submit it, obtaining the output RDF (Another tool, RDFSyntaxConverter,
8 is included to convert RDF to tab delimited files and other RDF syntaxes).
8 9
9 This client is part of a larger project that provides SADI services as 10 This client is part of a larger project that provides SADI services as
10 Galaxy tools, SADI-Galaxy. 11 Galaxy tools, SADI-Galaxy.
11 12
12 More information: 13 More information:
21 22
22 Download and uncompress anywhere you like, and then: 23 Download and uncompress anywhere you like, and then:
23 24
24 1.- Stop Galaxy. 25 1.- Stop Galaxy.
25 26
26 2.- Copy sadi_generic.jar galaxy-dist/tool-data/shared/jars/ 27 2.- Copy sadi_generic.jar and RDFSyntaxConverter.jar to galaxy-dist/tool-data/shared/jars/
27 28
28 3.- Create directory galaxy-dist/tools/SADI/ 29 3.- Create directory galaxy-dist/tools/SADI/
29 30
30 4.- Copy sadi_generic.xml to galaxy-dist/tools/SADI/ 31 4.- Copy sadi_generic.xml and RDFSyntaxConverter.xml to galaxy-dist/tools/SADI/
31 32
32 5.- Add the following lines to /galaxy-dist/tool_conf.xml: 33 5.- Add the following lines to /galaxy-dist/tool_conf.xml:
33 34
34 <section name="SADI services" id="SADI"> 35 <section name="SADI services" id="SADI">
35 <tool file="SADI/sadi_generic.xml"/> 36 <tool file="SADI/sadi_generic.xml"/>
37 <tool file="SADI/RDFSyntaxConverter.xml.xml"/>
36 </section> 38 </section>
37 39
38 6.- Start Galaxy. 40 6.- Start Galaxy.
39 41
40 (You can also install automatically from the tool shed but make 42 (You can also install automatically from the tool shed but make
41 sure to copy the jar to right place) 43 sure to copy the jars to right place)
42 44
43 45
44 46
45 CONTACT 47 CONTACT
46 ======= 48 =======