Mercurial > repos > mikel-egana-aranguren > sparql_galaxy

comparison README @ 2:b8bf1af83841 draft

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Paste query added, query engine improved, examples added
author Mikel Egana Aranguren <mikel-egana-aranguren@toolshed.g2.bx.psu.edu>
date Wed, 04 Dec 2013 08:17:00 +0100
parents 117a4b4c002d
children 24ad2706526c
comparison
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1:117a4b4c002d 2:b8bf1af83841
1 INSTALLATION VIA MERCURIAL (RECOMMENDED) 1 INSTALLATION VIA TOOL-SHED
2 ======================================== 2 ==========================
3
4 1.- Install through Admin >> Search and browse tool sheds
5
6 2.- Copy SPARQLGalaxy.jar and SPARQLGalaxy_TEXT.jar to galaxy-dist/tool-data/shared/jars/
7
8
9 INSTALLATION VIA MERCURIAL
10 ==========================
3 11
4 1.- Stop Galaxy. 12 1.- Stop Galaxy.
5 13
6 2.- Move to galaxy-dist/tools/ 14 2.- Move to galaxy-dist/tools/
7 15
8 3.- Clone the SPARQL-Galaxy repository with mercurial: 16 3.- Clone the SPARQL-Galaxy repository with mercurial:
9 17
10 hg clone http://mikel-egana-aranguren@toolshed.g2.bx.psu.edu/repos/mikel-egana-aranguren/sparql_galaxy 18 hg clone http://mikel-egana-aranguren@toolshed.g2.bx.psu.edu/repos/mikel-egana-aranguren/sparql_galaxy
11 19
12 4.- Move to galaxy-dist/tools/sparql_galaxy and copy SPARQLGalaxy.jar to galaxy-dist/tool-data/shared/jars/ 20 4.- Move to galaxy-dist/tools/sparql_galaxy and copy SPARQLGalaxy.jar and SPARQLGalaxy_TEXT.jar to galaxy-dist/tool-data/shared/jars/
13 21
14 5.- Add the following lines to /galaxy-dist/tool_conf.xml: 22 5.- Add the following lines to /galaxy-dist/tool_conf.xml:
15 23
16 <section name="SPARQL-Galaxy" id="SPARQLGalaxy"> 24 <section name="SPARQL-Galaxy" id="SPARQLGalaxy">
17 <tool file="sparql_galaxy/SPARQLGalaxy.xml"/> 25 <tool file="sparql_galaxy/SPARQLGalaxy.xml"/>
43 51
44 Download and uncompress anywhere you like, and then: 52 Download and uncompress anywhere you like, and then:
45 53
46 1.- Stop Galaxy. 54 1.- Stop Galaxy.
47 55
48 2.- SPARQLGalaxy.jar to galaxy-dist/tool-data/shared/jars/ 56 2.- Copy SPARQLGalaxy.jar and SPARQLGalaxy_TEXT.jar to galaxy-dist/tool-data/shared/jars/
49 57
50 3.- Create directory galaxy-dist/tools/sparql_galaxy/ 58 3.- Create directory galaxy-dist/tools/sparql_galaxy/
51 59
52 4.- Copy SPARQLGalaxy.xml to galaxy-dist/tools/sparql_galaxy/ 60 4.- Copy SPARQLGalaxy.xml to galaxy-dist/tools/sparql_galaxy/
53 61