Mercurial > repos > mikel-egana-aranguren > sparql_galaxy
changeset 1:117a4b4c002d draft
Added README but installation procedure not tested yet, pushed for backup
author | Mikel Egana Aranguren <mikel-egana-aranguren@toolshed.g2.bx.psu.edu> |
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date | Thu, 25 Oct 2012 18:35:25 +0200 |
parents | 137f9a4a6337 |
children | b8bf1af83841 |
files | README |
diffstat | 1 files changed, 99 insertions(+), 0 deletions(-) [+] |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/README Thu Oct 25 18:35:25 2012 +0200 @@ -0,0 +1,99 @@ +INSTALLATION VIA MERCURIAL (RECOMMENDED) +======================================== + +1.- Stop Galaxy. + +2.- Move to galaxy-dist/tools/ + +3.- Clone the SPARQL-Galaxy repository with mercurial: + +hg clone http://mikel-egana-aranguren@toolshed.g2.bx.psu.edu/repos/mikel-egana-aranguren/sparql_galaxy + +4.- Move to galaxy-dist/tools/sparql_galaxy and copy SPARQLGalaxy.jar to galaxy-dist/tool-data/shared/jars/ + +5.- Add the following lines to /galaxy-dist/tool_conf.xml: + + <section name="SPARQL-Galaxy" id="SPARQLGalaxy"> + <tool file="sparql_galaxy/SPARQLGalaxy.xml"/> + </section> + +6.- Start Galaxy. + +For updates: + +1.- Stop Galaxy. + +2.- Move to galaxy-dist/tools/sparql_galaxy/ + +3.- Pull changes and update working copy with mercurial: + +hg pull +hg update + +4.- Copy SPARQLGalaxy.jar to galaxy-dist/tool-data/shared/jars/ + +5.- Only edit galaxy-dist/tool_conf.xml in case a tool (an XML file) has been added/removed. + +6.- Start Galaxy. + + + +MANUAL INSTALLATION (DIRECT DOWNLOAD) +===================================== + +Download and uncompress anywhere you like, and then: + +1.- Stop Galaxy. + +2.- SPARQLGalaxy.jar to galaxy-dist/tool-data/shared/jars/ + +3.- Create directory galaxy-dist/tools/sparql_galaxy/ + +4.- Copy SPARQLGalaxy.xml to galaxy-dist/tools/sparql_galaxy/ + +5.- Add the following lines to /galaxy-dist/tool_conf.xml: + + <section name="SPARQL-Galaxy" id="SPARQLGalaxy"> + <tool file="sparql_galaxy/SPARQLGalaxy.xml"/> + </section> + +6.- Start Galaxy. + + + +CONTACT +======= + +Please send any request or comment to mikel.egana.aranguren@gmail.com. + + + +ACKNOWLEDGEMENTS +================ + +This work is funded by the Marie Curie Cofund program of the EU, FP7, +and the Isaac Peral Program. + + + +COPYRIGHT AND LICENSE +===================== + +Copyright (c) 2011 Mikel EgaƱa Aranguren, Alejandro Rodriguez Gonzalez + +SPARQL-Galaxy is free software: you can redistribute it and/or modify it under the +terms of the GNU General Public License as published by the Free +Software Foundation, either version 3 of the License, or (at your +option) any later version. + +This program is distributed in the hope that it will be useful, +but WITHOUT ANY WARRANTY; without even the implied warranty of +MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +GNU General Public License for more details. + +You should have received a copy of the GNU General Public License +along with this program. If not, see <http://www.gnu.org/licenses/>. + +JENA has its own license. + +