Mercurial > repos > miller-lab > genome_diversity

annotate reorder.xml @ 25:cba0d7a63b82

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
workaround for gd_genotype datatype admix shift int -> float
author Richard Burhans <burhans@bx.psu.edu>
date Wed, 29 May 2013 13:49:19 -0400
parents 248b06e86022
children 8997f2ca8c7a
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
24
248b06e86022 Added gd_genotype datatype. Modified tools to support new datatype.
Richard Burhans <burhans@bx.psu.edu>
parents:
diff changeset
1 <tool id="gd_reorder" name="Reorder" version="1.0.0">
248b06e86022 Added gd_genotype datatype. Modified tools to support new datatype.
Richard Burhans <burhans@bx.psu.edu>
parents:
diff changeset
2 <description>individuals</description>
248b06e86022 Added gd_genotype datatype. Modified tools to support new datatype.
Richard Burhans <burhans@bx.psu.edu>
parents:
diff changeset
3
248b06e86022 Added gd_genotype datatype. Modified tools to support new datatype.
Richard Burhans <burhans@bx.psu.edu>
parents:
diff changeset
4 <command interpreter="python">
248b06e86022 Added gd_genotype datatype. Modified tools to support new datatype.
Richard Burhans <burhans@bx.psu.edu>
parents:
diff changeset
5 reorder.py "$input" "$output" "$order"
248b06e86022 Added gd_genotype datatype. Modified tools to support new datatype.
Richard Burhans <burhans@bx.psu.edu>
parents:
diff changeset
6 </command>
248b06e86022 Added gd_genotype datatype. Modified tools to support new datatype.
Richard Burhans <burhans@bx.psu.edu>
parents:
diff changeset
7
248b06e86022 Added gd_genotype datatype. Modified tools to support new datatype.
Richard Burhans <burhans@bx.psu.edu>
parents:
diff changeset
8 <inputs>
248b06e86022 Added gd_genotype datatype. Modified tools to support new datatype.
Richard Burhans <burhans@bx.psu.edu>
parents:
diff changeset
9 <param name="input" type="data" format="gd_indivs" label="Individuals dataset" />
248b06e86022 Added gd_genotype datatype. Modified tools to support new datatype.
Richard Burhans <burhans@bx.psu.edu>
parents:
diff changeset
10 <param name="order" size="40" type="text" value="" label="New order"/>
248b06e86022 Added gd_genotype datatype. Modified tools to support new datatype.
Richard Burhans <burhans@bx.psu.edu>
parents:
diff changeset
11 </inputs>
248b06e86022 Added gd_genotype datatype. Modified tools to support new datatype.
Richard Burhans <burhans@bx.psu.edu>
parents:
diff changeset
12
248b06e86022 Added gd_genotype datatype. Modified tools to support new datatype.
Richard Burhans <burhans@bx.psu.edu>
parents:
diff changeset
13 <outputs>
248b06e86022 Added gd_genotype datatype. Modified tools to support new datatype.
Richard Burhans <burhans@bx.psu.edu>
parents:
diff changeset
14 <data name="output" format="gd_indivs" metadata_source="input"/>
248b06e86022 Added gd_genotype datatype. Modified tools to support new datatype.
Richard Burhans <burhans@bx.psu.edu>
parents:
diff changeset
15 </outputs>
248b06e86022 Added gd_genotype datatype. Modified tools to support new datatype.
Richard Burhans <burhans@bx.psu.edu>
parents:
diff changeset
16
248b06e86022 Added gd_genotype datatype. Modified tools to support new datatype.
Richard Burhans <burhans@bx.psu.edu>
parents:
diff changeset
17 <help>
248b06e86022 Added gd_genotype datatype. Modified tools to support new datatype.
Richard Burhans <burhans@bx.psu.edu>
parents:
diff changeset
18 </help>
248b06e86022 Added gd_genotype datatype. Modified tools to support new datatype.
Richard Burhans <burhans@bx.psu.edu>
parents:
diff changeset
19 </tool>