comparison tool-data/gd.restriction_enzymes.txt.sample @ 12:4b6590dd7250

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author miller-lab
date Wed, 12 Sep 2012 17:10:26 -0400
parents 2c498d40ecde
children
comparison
equal deleted inserted replaced
11:d4ec09e8079f 12:4b6590dd7250
1 Acc65I - GGTACC Acc65I
2 AccB7I - CCANNNNNTGG AccB7I
3 AccI - GT(A/C)(G/T)AC AccI
4 AccIII - TCCGGA AccIII
5 AcyI - G(A/G)CG(C/T)C AcyI
6 AgeI - ACCGGT AgeI
7 AluI - AGCT AluI
8 Alw44I - GTGCAC Alw44I
9 ApaI - GGGCCC ApaI
10 AvaI - C(C/T)CG(A/G)G AvaI
11 AvaII - GG(A/T)CC AvaII
12 BalI - TGGCCA BalI
13 BamHI - GGATCC BamHI
14 BanI - GG(C/T)(A/G)CC BanI
15 BanII - G(A/G)GC(C/T)C BanII
16 BbuI - GCATGC BbuI
17 BclI - TGATCA BclI
18 BglI - GCCNNNNNGGC BglI
19 BglII - AGATCT BglII
20 BsaMI - GAATGC BsaMI
21 BsaOI - CG(A/G)(C/T)CG BsaOI
22 Bsp1286I - G(A/G/T)GC(A/C/T)C Bsp1286I
23 BsrBRI - GATNNNNATC BsrBRI
24 BsrSI - ACTGG BsrSI
25 BssHII - GCGCGC BssHII
26 Bst98I - CTTAAG Bst98I
27 BstEII - GGTNACC BstEII
28 BstOI - CC(A/T)GG BstOI
29 BstXI - CCANNNNNNTGG BstXI
30 BstZI - CGGCCG BstZI
31 Bsu36I - CCTNAGG Bsu36I
32 CfoI - GCGC CfoI
33 ClaI - ATCGAT ClaI
34 Csp45I - TTCGAA Csp45I
35 CspI - CGG(A/T)CCG CspI
36 DdeI - CTNAG DdeI
37 DpnI - GATC DpnI
38 DraI - TTTAAA DraI
39 EclHKI - GACNNNNNGTC EclHKI
40 Eco47III - AGCGCT Eco47III
41 Eco52I - CGGCCG Eco52I
42 Eco72I - CACGTG Eco72I
43 EcoRI - GAATTC EcoRI
44 EcoRV - GATATC EcoRV
45 HaeII - (A/G)GCGC(C/T) HaeII
46 HaeIII - GGCC HaeIII
47 HhaI - GCGC HhaI
48 HincII - GT(C/T)(A/G)AC HincII
49 HindIII - AAGCTT HindIII
50 HinfI - GANTC HinfI
51 HpaI - GTTAAC HpaI
52 HpaII - CCGG HpaII
53 Hsp92I - G(A/G)CG(C/T)C Hsp92I
54 Hsp92II - CATG Hsp92II
55 I-PpoI - TAACTATGACTCTCTTAAGGTAGCCAAAT I-PpoI
56 KpnI - GGTACC KpnI
57 MboI - GATC MboI
58 MluI - ACGCGT MluI
59 MspA1I - C(A/C)GC(G/T)G MspA1I
60 MspI - CCGG MspI
61 NaeI - GCCGGC NaeI
62 NarI - GGCGCC NarI
63 NciI - CC(C/G)GG NciI
64 NcoI - CCATGG NcoI
65 NdeI - CATATG NdeI
66 NgoMIV - GCCGGC NgoMIV
67 NheI - GCTAGC NheI
68 NotI - GCGGCCGC NotI
69 NruI - TCGCGA NruI
70 NsiI - ATGCAT NsiI
71 PstI - CTGCAG PstI
72 PvuI - CGATCG PvuI
73 PvuII - CAGCTG PvuII
74 RsaI - GTAC RsaI
75 SacI - GAGCTC SacI
76 SacII - CCGCGG SacII
77 SalI - GTCGAC SalI
78 Sau3AI - GATC Sau3AI
79 Sau96I - GGNCC Sau96I
80 ScaI - AGTACT ScaI
81 SfiI - GGCCNNNNNGGCC SfiI
82 SgfI - GCGATCGC SgfI
83 SinI - GG(A/T)CC SinI
84 SmaI - CCCGGG SmaI
85 SnaBI - TACGTA SnaBI
86 SpeI - ACTAGT SpeI
87 SphI - GCATGC SphI
88 SspI - AATATT SspI
89 StuI - AGGCCT StuI
90 StyI - CC(A/T)(A/T)GG StyI
91 TaqI - TCGA TaqI
92 Tru9I - TTAA Tru9I
93 Tth111I - GACNNNGTC Tth111I
94 VspI - ATTAAT VspI
95 XbaI - TCTAGA XbaI
96 XhoI - CTCGAG XhoI
97 XhoII - (A/G)GATC(C/T) XhoII
98 XmaI - CCCGGG XmaI
99 XmnI - GAANNNNTTC XmnI