Mercurial > repos > miller-lab > genome_diversity

comparison pca.xml @ 10:9b92372de9f6

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rename snp to gsSnp, sap to gdSap
author Richard Burhans <burhans@bx.psu.edu>
date Tue, 04 Sep 2012 12:49:53 -0400
parents 7a94f11fe71f
children
comparison
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9:22fe0154fa54 10:9b92372de9f6
24 </param> 24 </param>
25 25
26 <output name="output" file="test_out/pca/pca.html" ftype="html" compare="diff" lines_diff="2"> 26 <output name="output" file="test_out/pca/pca.html" ftype="html" compare="diff" lines_diff="2">
27 <extra_files type="file" name="admix.geno" value="test_out/pca/admix.geno" /> 27 <extra_files type="file" name="admix.geno" value="test_out/pca/admix.geno" />
28 <extra_files type="file" name="admix.ind" value="test_out/pca/admix.ind" /> 28 <extra_files type="file" name="admix.ind" value="test_out/pca/admix.ind" />
29 <extra_files type="file" name="admix.snp" value="test_out/pca/admix.snp" /> 29 <extra_files type="file" name="admix.gdSnp" value="test_out/pca/admix.gdSnp" />
30 <extra_files type="file" name="coordinates.txt" value="test_out/pca/coordinates.txt" /> 30 <extra_files type="file" name="coordinates.txt" value="test_out/pca/coordinates.txt" />
31 <extra_files type="file" name="explained.txt" value="test_out/pca/explained.txt" /> 31 <extra_files type="file" name="explained.txt" value="test_out/pca/explained.txt" />
32 <extra_files type="file" name="par.admix" value="test_out/pca/par.admix" compare="diff" lines_diff="10" /> 32 <extra_files type="file" name="par.admix" value="test_out/pca/par.admix" compare="diff" lines_diff="10" />
33 <extra_files type="file" name="PCA.pdf" value="test_out/pca/PCA.pdf" compare="sim_size" delta = "1000" /> 33 <extra_files type="file" name="PCA.pdf" value="test_out/pca/PCA.pdf" compare="sim_size" delta = "1000" />
34 </output> 34 </output>