Mercurial > repos > miller-lab > genome_diversity
comparison average_fst.xml @ 7:e29f4d801bb0
change wsf -> snp; wpf -> sap
author | Richard Burhans <burhans@bx.psu.edu> |
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date | Wed, 18 Apr 2012 11:12:21 -0400 |
parents | 2c498d40ecde |
children | 9b92372de9f6 |
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6:626b714f72bb | 7:e29f4d801bb0 |
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13 "$arg" | 13 "$arg" |
14 #end for | 14 #end for |
15 </command> | 15 </command> |
16 | 16 |
17 <inputs> | 17 <inputs> |
18 <param name="input" type="data" format="wsf" label="SNP table" /> | 18 <param name="input" type="data" format="snp" label="SNP table" /> |
19 <param name="p1_input" type="data" format="ind" label="Population 1 individuals" /> | 19 <param name="p1_input" type="data" format="ind" label="Population 1 individuals" /> |
20 <param name="p2_input" type="data" format="ind" label="Population 2 individuals" /> | 20 <param name="p2_input" type="data" format="ind" label="Population 2 individuals" /> |
21 | 21 |
22 <conditional name="data_source"> | 22 <conditional name="data_source"> |
23 <param name="ds_choice" type="select" format="integer" label="Data source"> | 23 <param name="ds_choice" type="select" format="integer" label="Data source"> |
59 <data name="output" format="txt" /> | 59 <data name="output" format="txt" /> |
60 </outputs> | 60 </outputs> |
61 | 61 |
62 <tests> | 62 <tests> |
63 <test> | 63 <test> |
64 <param name="input" value="test_in/sample.wsf" ftype="wsf" /> | 64 <param name="input" value="test_in/sample.snp" ftype="snp" /> |
65 <param name="p1_input" value="test_in/a.ind" ftype="ind" /> | 65 <param name="p1_input" value="test_in/a.ind" ftype="ind" /> |
66 <param name="p2_input" value="test_in/b.ind" ftype="ind" /> | 66 <param name="p2_input" value="test_in/b.ind" ftype="ind" /> |
67 <param name="ds_choice" value="0" /> | 67 <param name="ds_choice" value="0" /> |
68 <param name="min_value" value="3" /> | 68 <param name="min_value" value="3" /> |
69 <param name="discard_fixed" value="1" /> | 69 <param name="discard_fixed" value="1" /> |