Mercurial > repos > miller-lab > genome_diversity

diff add_fst_column.xml @ 22:95a05c1ef5d5

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update to devshed revision aaece207bd01
author Richard Burhans <burhans@bx.psu.edu>
date Mon, 11 Mar 2013 11:28:06 -0400
parents d6b961721037
children 248b06e86022
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--- a/add_fst_column.xml	Mon Nov 05 12:44:17 2012 -0500
+++ b/add_fst_column.xml	Mon Mar 11 11:28:06 2013 -0400
@@ -15,8 +15,8 @@
     <param name="p2_input" type="data" format="gd_indivs" label="Population 2 individuals" />
 
     <param name="data_source" type="select" format="integer" label="Frequency metric">
-      <option value="0" selected="true">sequence coverage</option>
-      <option value="1">estimated genotype</option>
+      <option value="0">sequence coverage</option>
+      <option value="1" selected="true">estimated genotype</option>
     </param>
 
     <param name="min_reads" type="integer" min="0" value="0" label="Minimum total read count for a population" />
@@ -33,9 +33,9 @@
     </param>
 
     <param name="biased" type="select" label="FST estimator">
-      <option value="0" selected="true">Wright's original definition</option>
+      <option value="0">Wright's original definition</option>
       <option value="1">the Weir-Cockerham estimator</option>
-      <option value="2">the Reich-Patterson estimator</option>
+      <option value="2" selected="true">the Reich-Patterson estimator</option>
     </param>
 
   </inputs>