Mercurial > repos > miller-lab > genome_diversity

diff rank_pathways.xml @ 7:e29f4d801bb0

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change wsf -> snp; wpf -> sap
author Richard Burhans <burhans@bx.psu.edu>
date Wed, 18 Apr 2012 11:12:21 -0400
parents 2c498d40ecde
children 9b92372de9f6
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--- a/rank_pathways.xml	Tue Apr 10 13:51:19 2012 -0400
+++ b/rank_pathways.xml	Wed Apr 18 11:12:21 2012 -0400
@@ -16,7 +16,7 @@
   </command>
 
   <inputs>
-    <param name="input" type="data" format="wpf" label="Table">
+    <param name="input" type="data" format="sap" label="Table">
         <validator type="metadata" check="kegg_gene,kegg_path" message="Missing KEGG gene code column and/or KEGG pathway code/name column metadata.  Click the pencil icon in the history item to edit/save the metadata attributes" />
     </param>
     <param name="output_format" type="select" label="Output format">
@@ -31,7 +31,7 @@
 
   <tests>
     <test>
-      <param name="input" value="test_in/sample.wpf" ftype="wpf" />
+      <param name="input" value="test_in/sample.sap" ftype="sap" />
       <param name="output_format" value="a" />
       <output name="output" file="test_out/rank_pathways/rank_pathways.tabular" />
     </test>