Mercurial > repos > miller-lab > package_fisher_0_1_4

comparison tool_dependencies.xml @ 0:c84c287b81a4

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Initial version
author miller-lab
date Thu, 19 Sep 2013 18:14:12 -0400
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children be2fc454d121
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-1:000000000000 0:c84c287b81a4
1 <?xml version="1.0"?>
2 <tool_dependency>
3 <package name="numpy" version="1.7.1">
4 <repository prior_installation_required="True" toolshed="http://toolshed.g2.bx.psu.edu/" owner="iuc" name="package_numpy_1_7" changeset_revision="74c21f9bdc39" />
5 </package>
6
7 <package name="fisher" version="0.1.4">
8 <install version="1.0">
9 <actions>
10 <!-- Download source code -->
11 <action type="download_by_url">https://pypi.python.org/packages/source/f/fisher/fisher-0.1.4.tar.gz</action>
12
13 <!-- Get PYTHONPATH_NUMPY from numpy package -->
14 <action type="set_environment_for_install">
15 <repository toolshed="http://toolshed.g2.bx.psu.edu/" owner="iuc" name="package_numpy_1_7" changeset_revision="74c21f9bdc39">
16 <package name="numpy" version="1.7.1" />
17 </repository>
18 </action>
19
20 <!-- Build and install fisher -->
21 <action type="shell_command">mkdir -p $INSTALL_DIR/lib/python</action>
22 <action type="shell_command">PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python:$PYTHONPATH_NUMPY python setup.py install --home $INSTALL_DIR</action>
23
24 <!-- Set environment for dependent repositories -->
25 <action type="set_environment">
26 <environment_variable action="append_to" name="PYTHONPATH">$ENV[PYTHONPATH_NUMPY]</environment_variable>
27 <environment_variable action="append_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable>
28 </action>
29 </actions>
30 </install>
31 </package>
32 </tool_dependency>