Mercurial > repos > miller-lab > snp_analysis_conversion

annotate test-data/masterVar_output.txt @ 3:edf12470a1a6 default tip

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Bugfix from Belinda, in vcf2pgSnp.pl
author Cathy Riemer <cathy+hg@bx.psu.edu>
date Thu, 19 Mar 2015 12:06:34 -0400
parents 35c20b109be5
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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2
35c20b109be5 Retrying upload with "bare" tarball (i.e. one without a top containing directory).
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1 chr1 41980 41981 G 1 1 76
35c20b109be5 Retrying upload with "bare" tarball (i.e. one without a top containing directory).
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2 chr1 51672 51673 C 1 1 53
35c20b109be5 Retrying upload with "bare" tarball (i.e. one without a top containing directory).
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3 chr1 52237 52238 G 1 7 63
35c20b109be5 Retrying upload with "bare" tarball (i.e. one without a top containing directory).
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4 chr1 53205 53206 C/G 2 7,30 93,127
35c20b109be5 Retrying upload with "bare" tarball (i.e. one without a top containing directory).
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5 chr1 54042 54043 T/C 2 3,10 66,84
35c20b109be5 Retrying upload with "bare" tarball (i.e. one without a top containing directory).
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6 chr1 54585 54586 C/T 2 9,19 94,94
35c20b109be5 Retrying upload with "bare" tarball (i.e. one without a top containing directory).
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7 chr1 55163 55164 A 1 9 76
35c20b109be5 Retrying upload with "bare" tarball (i.e. one without a top containing directory).
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8 chr1 55301 55302 T/C 2 15,19 87,95
35c20b109be5 Retrying upload with "bare" tarball (i.e. one without a top containing directory).
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9 chr1 55321 55322 T/C 2 12,12 95,95
35c20b109be5 Retrying upload with "bare" tarball (i.e. one without a top containing directory).
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10 chr1 55325 55326 C/T 2 12,11 95,95
35c20b109be5 Retrying upload with "bare" tarball (i.e. one without a top containing directory).
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11 chr1 55925 55926 C 1 12 66
35c20b109be5 Retrying upload with "bare" tarball (i.e. one without a top containing directory).
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12 chr1 57951 57952 C 1 2 72
35c20b109be5 Retrying upload with "bare" tarball (i.e. one without a top containing directory).
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13 chr1 58210 58211 G 1 11 98
35c20b109be5 Retrying upload with "bare" tarball (i.e. one without a top containing directory).
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14 chr1 59050 59051 G/A 2 6,21 66,91
35c20b109be5 Retrying upload with "bare" tarball (i.e. one without a top containing directory).
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15 chr1 59343 59344 T/C 2 25,23 57,120
35c20b109be5 Retrying upload with "bare" tarball (i.e. one without a top containing directory).
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16 chr1 59497 59498 C/T 2 12,15 74,120
35c20b109be5 Retrying upload with "bare" tarball (i.e. one without a top containing directory).
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17 chr1 60828 60829 T/C 2 1,11 60,97
35c20b109be5 Retrying upload with "bare" tarball (i.e. one without a top containing directory).
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18 chr1 61441 61442 G 1 8 23
35c20b109be5 Retrying upload with "bare" tarball (i.e. one without a top containing directory).
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19 chr1 68305 68306 T/C 2 27,20 44,44
35c20b109be5 Retrying upload with "bare" tarball (i.e. one without a top containing directory).
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20 chr1 68315 68316 C/T 2 27,20 44,44
35c20b109be5 Retrying upload with "bare" tarball (i.e. one without a top containing directory).
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21 chr1 69452 69453 A/G 2 6,37 61,121
35c20b109be5 Retrying upload with "bare" tarball (i.e. one without a top containing directory).
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22 chr1 69510 69511 G 1 3 123
35c20b109be5 Retrying upload with "bare" tarball (i.e. one without a top containing directory).
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23 chr1 69551 69552 C/G 2 4,27 98,98
35c20b109be5 Retrying upload with "bare" tarball (i.e. one without a top containing directory).
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24 chr1 69568 69569 C/T 2 3,29 98,98
35c20b109be5 Retrying upload with "bare" tarball (i.e. one without a top containing directory).
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25 chr1 77461 77462 A 1 4 26
35c20b109be5 Retrying upload with "bare" tarball (i.e. one without a top containing directory).
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26 chr1 82733 82734 C/T 2 18,17 42,118
35c20b109be5 Retrying upload with "bare" tarball (i.e. one without a top containing directory).
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27 chr1 233472 233473 G/C 2 21,42 118,118