Mercurial > repos > mingchen0919 > aurora_deseq2_site

comparison DESeq_03.Rmd @ 0:6f94b4b9de44 draft

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planemo upload
author mingchen0919
date Tue, 27 Feb 2018 23:57:53 -0500
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-1:000000000000 0:6f94b4b9de44
1 ---
2 output: html_document
3 ---
4
5 ```{r setup, include=FALSE, warning=FALSE, message=FALSE}
6 knitr::opts_chunk$set(
7 echo = as.logical(opt$X_e),
8 error = TRUE
9 )
10 ```
11
12
13 # Peek at data {.tabset}
14
15 ## Count Data
16
17 ```{r 'count data'}
18 datatable(head(counts(dds), 100), style="bootstrap",
19 class="table-condensed", options = list(dom = 'tp', scrollX = TRUE))
20 ```
21
22 ## Sample Table
23
24 ```{r 'sample table'}
25 datatable(sample_table, style="bootstrap",
26 class="table-condensed", options = list(dom = 'tp', scrollX = TRUE))
27 ```