Mercurial > repos > mingchen0919 > aurora_star_site

changeset 2:c04ef267c2c9 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload commit 104ae24ee30761a0099eeb91362ed1e3e13aba4b-dirty
author mingchen0919
date Tue, 01 May 2018 11:13:34 -0400
parents c8c0b708c221
children 071638eddf9c
files 01_index_genome.Rmd 02_mapping.Rmd 03_sam_to_sorted_bam.Rmd 04_mapping_evaluation.Rmd
diffstat 4 files changed, 0 insertions(+), 6 deletions(-) [+]
line wrap: on
line diff
--- a/01_index_genome.Rmd	Tue May 01 11:07:53 2018 -0400
+++ b/01_index_genome.Rmd	Tue May 01 11:13:34 2018 -0400
@@ -9,14 +9,11 @@
 knitr::opts_chunk$set(error = TRUE, echo = FALSE)
 ```
 
-## Job scripts
 
 ```{bash, echo=FALSE}
 sh ${TOOL_INSTALL_DIR}/build-and-run-job-scripts.sh
 ```
 
-### Index genome
-
 ```{r echo=FALSE,results='asis'}
 # display content of the job-script.sh file.
 cat('```bash\n')
--- a/02_mapping.Rmd	Tue May 01 11:07:53 2018 -0400
+++ b/02_mapping.Rmd	Tue May 01 11:13:34 2018 -0400
@@ -9,7 +9,6 @@
 knitr::opts_chunk$set(error = TRUE, echo = FALSE)
 ```
 
-### Mapping
 
 ```{r echo=FALSE,results='asis'}
 # display content of the job-script.sh file.
--- a/03_sam_to_sorted_bam.Rmd	Tue May 01 11:07:53 2018 -0400
+++ b/03_sam_to_sorted_bam.Rmd	Tue May 01 11:13:34 2018 -0400
@@ -9,7 +9,6 @@
 knitr::opts_chunk$set(error = TRUE, echo = FALSE)
 ```
 
-### SAM to sorted BAM
 
 ```{r echo=FALSE,warning=FALSE,results='asis'}
 # display content of the job-script.sh file.
--- a/04_mapping_evaluation.Rmd	Tue May 01 11:07:53 2018 -0400
+++ b/04_mapping_evaluation.Rmd	Tue May 01 11:13:34 2018 -0400
@@ -9,7 +9,6 @@
 knitr::opts_chunk$set(error = TRUE, echo = FALSE)
 ```
 
-### Mapping evaluation
 
 ```{r echo=FALSE,warning=FALSE,results='asis'}
 # display content of the job-script.sh file.