Mercurial > repos > mingchen0919 > rmarkdown_collection_builder

comparison collection_list_render.R @ 4:63e9500cdeec draft

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planemo upload for repository https://github.com/statonlab/docker-GRReport/tree/master/my_tools/rmarkdown_collection_builder commit 436d91722b309f61890d13d7ed28cd43c79a5c74
author mingchen0919
date Mon, 25 Sep 2017 16:41:49 -0400
parents cb6efa0f0cb6
children
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3:cb6efa0f0cb6 4:63e9500cdeec
77 close(fileConn) 77 close(fileConn)
78 }) 78 })
79 79
80 #------ 3. render all Rmd files -------- 80 #------ 3. render all Rmd files --------
81 render('list_collection.Rmd', output_file = opt$list_collection_html) 81 render('list_collection.Rmd', output_file = opt$list_collection_html)
82 cat('test') 82
83 83
84 #-------4. manipulate outputs ----------------------------- 84 #-------4. manipulate outputs -----------------------------