Mercurial > repos > mingchen0919 > rmarkdown_collection_builder
comparison collection_list.xml @ 5:66022ba24ac7 draft
planemo upload for repository https://github.com/statonlab/docker-GRReport/tree/master/my_tools/rmarkdown_collection_builder commit 51c9df9f3f883537269f8928f92052457b29f744-dirty
author | mingchen0919 |
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date | Tue, 26 Sep 2017 00:16:09 -0400 |
parents | 63e9500cdeec |
children | a0c8b2b25774 |
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4:63e9500cdeec | 5:66022ba24ac7 |
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36 -t '${__tool_directory__}/collection_list.Rmd' | 36 -t '${__tool_directory__}/collection_list.Rmd' |
37 ]]> | 37 ]]> |
38 </command> | 38 </command> |
39 <inputs> | 39 <inputs> |
40 <param type="data" name="file_list" multiple="true" /> | 40 <param type="data" name="file_list" multiple="true" /> |
41 <param type="text" name="format" label="the format of input files (e.g., fastq, fastqsanger, fasta)"/> | |
42 | |
41 <param type="boolean" name="echo" truevalue="TRUE" falsevalue="FALSE" checked="false" label="Display analysis code in report?" /> | 43 <param type="boolean" name="echo" truevalue="TRUE" falsevalue="FALSE" checked="false" label="Display analysis code in report?" /> |
42 <param type="text" name="format" label="the format of input files (e.g., fastq, fastqsanger, fasta)"/> | |
43 </inputs> | 44 </inputs> |
44 <outputs> | 45 <outputs> |
45 <data format="html" name="report" label="Collection builder report" /> | 46 <data format="html" name="report" label="Collection builder (list collection)" /> |
46 <collection type="list" name="list_collection"> | 47 <collection type="list" name="list_collection"> |
47 <discover_datasets pattern="__name_and_ext__" directory="files_directory" /> | 48 <discover_datasets pattern="__name_and_ext__" directory="files_directory" /> |
48 </collection> | 49 </collection> |
49 </outputs> | 50 </outputs> |
50 </tool> | 51 </tool> |