Mercurial > repos > mingchen0919 > rmarkdown_fastqc_site

diff _site.yml @ 7:d820be692d74 draft

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planemo upload for repository https://github.com/statonlab/docker-GRReport/tree/master/my_tools/rmarkdown_fastqc_site commit d91f269e8bc09a488ed2e005122bbb4a521f44a0-dirty
author mingchen0919
date Tue, 08 Aug 2017 12:36:13 -0400
parents d732d4526c6d
children 507eec497730
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/_site.yml	Tue Aug 08 12:36:13 2017 -0400
@@ -0,0 +1,29 @@
+name: "FastQC Website"
+output_dir: "my_site"
+navbar:
+    title: "FastQC"
+    type: inverse
+    left:
+        - text: "Home"
+          icon: fa-home
+          href: index.html
+        - text: "Evaluation Overview"
+          href: 01_evaluation_overview.html
+        - text: "Evaluation Items"
+          menu:
+            - text: "Per Base Quality Scores"
+              href: 1_per_base_quality_scores.html
+            - text: "Per Base N Content"
+              href: 2_per_base_N_content.html
+            - text: "Per Sequence Quality Scores"
+              href: 3_per_sequence_quality_scores.html
+            - text: "Per Sequence GC Content"
+              href: 4_per_sequence_GC_content.html
+            - text: "Per Base Sequence Content"
+              href: 5_per_base_sequence_content.html
+        - text: "Original FastQC Reports"
+          href: 02_fastqc_original_reports.html
+output:
+  html_document:
+    theme: cosmo
+    highlight: textmate
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