Mercurial > repos > mingchen0919 > rmarkdown_samtools_flagstat
diff rmarkdown_samtools_flagstat.xml @ 5:2a244f3c48a9 draft default tip
updates
author | mingchen0919 |
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date | Sun, 31 Dec 2017 16:11:49 -0500 |
parents | 1723d63c7d95 |
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--- a/rmarkdown_samtools_flagstat.xml Fri Dec 29 21:22:21 2017 -0500 +++ b/rmarkdown_samtools_flagstat.xml Sun Dec 31 16:11:49 2017 -0500 @@ -25,7 +25,7 @@ <param type="data" format="bam,sam" name="input_bam" label="BAM/SAM file" optional="False"/> </inputs> <outputs> - <data name="report" format="html" label="tool name report" hidden="false"/> + <data name="report" format="html" label="rmarkdown flagstat report" hidden="false"/> <data name="sink_message" format="txt" label="Warnings and Errors" from_work_dir="warnings_and_errors.txt" hidden="false"/> </outputs> <help><![CDATA[ @@ -41,7 +41,7 @@ journal={R package version 0.9}, volume={6}, year={2016} - ]]></citation> + }]]></citation> <citation type="bibtex"><![CDATA[@article{li2009sequence, title={The sequence alignment/map format and SAMtools}, author={Li, Heng and Handsaker, Bob and Wysoker, Alec and Fennell, Tim and Ruan, Jue and Homer, Nils and Marth, Gabor and Abecasis, Goncalo and Durbin, Richard},