Mercurial > repos > mingchen0919 > rmarkdown_samtools_flagstat

changeset 5:2a244f3c48a9 draft default tip

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updates
author mingchen0919
date Sun, 31 Dec 2017 16:11:49 -0500
parents 1723d63c7d95
children
files rmarkdown_samtools_flagstat.xml
diffstat 1 files changed, 2 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/rmarkdown_samtools_flagstat.xml	Fri Dec 29 21:22:21 2017 -0500
+++ b/rmarkdown_samtools_flagstat.xml	Sun Dec 31 16:11:49 2017 -0500
@@ -25,7 +25,7 @@
     <param type="data" format="bam,sam" name="input_bam" label="BAM/SAM file" optional="False"/>
   </inputs>
   <outputs>
-    <data name="report" format="html" label="tool name report" hidden="false"/>
+    <data name="report" format="html" label="rmarkdown flagstat report" hidden="false"/>
     <data name="sink_message" format="txt" label="Warnings and Errors" from_work_dir="warnings_and_errors.txt" hidden="false"/>
   </outputs>
   <help><![CDATA[
@@ -41,7 +41,7 @@
                         journal={R package version 0.9},
                         volume={6},
                         year={2016}
-                    ]]></citation>
+                    }]]></citation>
     <citation type="bibtex"><![CDATA[@article{li2009sequence,
   title={The sequence alignment/map format and SAMtools},
   author={Li, Heng and Handsaker, Bob and Wysoker, Alec and Fennell, Tim and Ruan, Jue and Homer, Nils and Marth, Gabor and Abecasis, Goncalo and Durbin, Richard},