Mercurial > repos > mingchen0919 > rmarkdown_wgcna

changeset 2:237210176a2b draft

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planemo upload for repository https://github.com/statonlab/docker-GRReport/tree/master/my_tools/rmarkdown_wgcna commit a23e23222252167ef7c3338a4872e84706df8f83-dirty
author mingchen0919
date Tue, 08 Aug 2017 14:33:59 -0400
parents 337fedd38522
children 240af4b07b92
files wgcna_construct_network.xml wgcna_eigengene_visualization.xml wgcna_preprocessing.xml
diffstat 3 files changed, 3 insertions(+), 0 deletions(-) [+]
line wrap: on
line diff
--- a/wgcna_construct_network.xml	Tue Aug 08 13:04:54 2017 -0400
+++ b/wgcna_construct_network.xml	Tue Aug 08 14:33:59 2017 -0400
@@ -1,5 +1,6 @@
 <tool id="wgcna_construct_network" name="WGCNA: construct network" version="1.0.0">
     <requirements>
+        <requirement type="package" version="1.19.2.1">pandoc</requirement>
         <requirement type="package" version="1.20.0">r-getopt</requirement>
         <requirement type="package" version="1.2">r-rmarkdown</requirement>
         <requirement type="package" version="1.8.4">r-plyr</requirement>
--- a/wgcna_eigengene_visualization.xml	Tue Aug 08 13:04:54 2017 -0400
+++ b/wgcna_eigengene_visualization.xml	Tue Aug 08 14:33:59 2017 -0400
@@ -1,5 +1,6 @@
 <tool id="wgcna_eigengene_visualization" name="WGCNA: eigengene visualization" version="1.0.0">
     <requirements>
+        <requirement type="package" version="1.19.2.1">pandoc</requirement>
         <requirement type="package" version="1.20.0">r-getopt</requirement>
         <requirement type="package" version="1.2">r-rmarkdown</requirement>
         <requirement type="package" version="1.8.4">r-plyr</requirement>
--- a/wgcna_preprocessing.xml	Tue Aug 08 13:04:54 2017 -0400
+++ b/wgcna_preprocessing.xml	Tue Aug 08 14:33:59 2017 -0400
@@ -1,5 +1,6 @@
 <tool id="wgcna_preprocessing" name="WGCNA: preprocessing" version="1.0.0">
     <requirements>
+        <requirement type="package" version="1.19.2.1">pandoc</requirement>
         <requirement type="package" version="1.20.0">r-getopt</requirement>
         <requirement type="package" version="1.2">r-rmarkdown</requirement>
         <requirement type="package" version="1.8.4">r-plyr</requirement>