# HG changeset patch # User modencode-dcc # Date 1358539403 18000 # Node ID 9f3c797511048b4b9c7fbe067bb3970741db6d12 # Parent d9e025a7e4e932aaf7ebc0efe92e5e94931a98a0 Uploaded diff -r d9e025a7e4e9 -r 9f3c79751104 tool_dependencies.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_dependencies.xml Fri Jan 18 15:03:23 2013 -0500 @@ -0,0 +1,26 @@ + <?xml version="1.0"?> +<tool_dependency> + <!--<set_environment version="1.0"> + <environment_variable name="SCRIPT_PATH" action="set_to">$REPOSITORY_INSTALL_DIR</environment_variable> + </set_environment>--> + <package name="macs" version="1.4.1"> + <install version="1.0"> + <actions> + <action type="download_by_url">https://github.com/modENCODE-DCC/Galaxy/blob/master/tools/tool_shed_dependencies/macs/macs.tar?raw=true</action> + <action type="move_directory_files"> + <source_directory>bin</source_directory> + <destination_directory>$INSTALL_DIR/bin</destination_directory> + </action> + <action type="move_directory_files"> + <source_directory>lib</source_directory> + <destination_directory>$INSTALL_DIR/lib</destination_directory> + </action> + <action type="set_environment"> + <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable> + <environment_variable name="PYTHONPATH" action="prepend_to">$INSTALL_DIR/lib/python2.6/site-packages</environment_variable> + </action> + </actions> + </install> + <readme>Macs depends on having python2.6 installed on all nodes of the work cluster</readme> + </package> +</tool_dependency> \ No newline at end of file