Mercurial > repos > modencode-dcc > macs

changeset 0:67e4a49f22f8 draft

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Uploaded
author modencode-dcc
date Fri, 18 Jan 2013 11:17:38 -0500
parents
children 426a52a01655
files genome_tables/.DS_Store genome_tables/._.DS_Store genome_tables/.svn/all-wcprops genome_tables/.svn/entries genome_tables/.svn/prop-base/genome_table.human.hg18.txt.svn-base genome_tables/.svn/prop-base/genome_table.human.hg19.txt.svn-base genome_tables/.svn/prop-base/genome_table.mm9.txt.svn-base genome_tables/.svn/prop-base/genome_table.worm.ws220.txt.svn-base genome_tables/.svn/text-base/genome_table.dmel.r5.32.txt.svn-base genome_tables/.svn/text-base/genome_table.human.hg18.txt.svn-base genome_tables/.svn/text-base/genome_table.human.hg19.txt.svn-base genome_tables/.svn/text-base/genome_table.mm9.txt.svn-base genome_tables/.svn/text-base/genome_table.worm.ws220.txt.svn-base genome_tables/genome_table.dmel.r5.32.txt genome_tables/genome_table.human.hg18.txt genome_tables/genome_table.human.hg19.txt genome_tables/genome_table.mm9.txt genome_tables/genome_table.worm.ws220.txt
diffstat 18 files changed, 441 insertions(+), 0 deletions(-) [+]
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Binary file genome_tables/.DS_Store has changed
Binary file genome_tables/._.DS_Store has changed
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/genome_tables/.svn/all-wcprops	Fri Jan 18 11:17:38 2013 -0500
@@ -0,0 +1,35 @@
+K 25
+svn:wc:ra_dav:version-url
+V 83
+/svn/modencode_galaxy/!svn/ver/81/modENCODE_Galaxy/modENCODE_DCC/macs/genome_tables
+END
+genome_table.mm9.txt
+K 25
+svn:wc:ra_dav:version-url
+V 104
+/svn/modencode_galaxy/!svn/ver/81/modENCODE_Galaxy/modENCODE_DCC/macs/genome_tables/genome_table.mm9.txt
+END
+genome_table.dmel.r5.32.txt
+K 25
+svn:wc:ra_dav:version-url
+V 111
+/svn/modencode_galaxy/!svn/ver/81/modENCODE_Galaxy/modENCODE_DCC/macs/genome_tables/genome_table.dmel.r5.32.txt
+END
+genome_table.human.hg18.txt
+K 25
+svn:wc:ra_dav:version-url
+V 111
+/svn/modencode_galaxy/!svn/ver/81/modENCODE_Galaxy/modENCODE_DCC/macs/genome_tables/genome_table.human.hg18.txt
+END
+genome_table.human.hg19.txt
+K 25
+svn:wc:ra_dav:version-url
+V 111
+/svn/modencode_galaxy/!svn/ver/81/modENCODE_Galaxy/modENCODE_DCC/macs/genome_tables/genome_table.human.hg19.txt
+END
+genome_table.worm.ws220.txt
+K 25
+svn:wc:ra_dav:version-url
+V 111
+/svn/modencode_galaxy/!svn/ver/81/modENCODE_Galaxy/modENCODE_DCC/macs/genome_tables/genome_table.worm.ws220.txt
+END
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/genome_tables/.svn/entries	Fri Jan 18 11:17:38 2013 -0500
@@ -0,0 +1,198 @@
+10
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+https://code.oicr.on.ca/svn/modencode_galaxy
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/genome_tables/.svn/prop-base/genome_table.human.hg18.txt.svn-base	Fri Jan 18 11:17:38 2013 -0500
@@ -0,0 +1,5 @@
+K 14
+svn:executable
+V 1
+*
+END
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/genome_tables/.svn/prop-base/genome_table.human.hg19.txt.svn-base	Fri Jan 18 11:17:38 2013 -0500
@@ -0,0 +1,5 @@
+K 14
+svn:executable
+V 1
+*
+END
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/genome_tables/.svn/prop-base/genome_table.mm9.txt.svn-base	Fri Jan 18 11:17:38 2013 -0500
@@ -0,0 +1,5 @@
+K 14
+svn:executable
+V 1
+*
+END
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/genome_tables/.svn/prop-base/genome_table.worm.ws220.txt.svn-base	Fri Jan 18 11:17:38 2013 -0500
@@ -0,0 +1,5 @@
+K 14
+svn:executable
+V 1
+*
+END
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/genome_tables/.svn/text-base/genome_table.dmel.r5.32.txt.svn-base	Fri Jan 18 11:17:38 2013 -0500
@@ -0,0 +1,15 @@
+YHet	347038
+dmel_mitochondrion_genome	19517
+2L	23011544
+X	22422827
+3L	24543557
+4	1351857
+2R	21146708
+3R	27905053
+Uextra	29004656
+2RHet	3288761
+2LHet	368872
+3LHet	2555491
+3RHet	2517507
+U	10049037
+XHet	204112
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/genome_tables/.svn/text-base/genome_table.human.hg18.txt.svn-base	Fri Jan 18 11:17:38 2013 -0500
@@ -0,0 +1,25 @@
+chr1 247249719
+chr2 242951149
+chr3 199501827
+chr4 191273063
+chr5 180857866
+chr6 170899992
+chr7 158821424
+chr8 146274826
+chr9 140273252
+chr10 135374737
+chr11 134452384
+chr12 132349534
+chr13 114142980
+chr14 106368585
+chr15 100338915
+chr16 88827254
+chr17 78774742
+chr18 76117153
+chr19 63811651
+chr20 62435964
+chr21 46944323
+chr22 49691432
+chrX 154913754
+chrY 57772954
+chrM 16571
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/genome_tables/.svn/text-base/genome_table.human.hg19.txt.svn-base	Fri Jan 18 11:17:38 2013 -0500
@@ -0,0 +1,25 @@
+chr1 249250621
+chr2 243199373
+chr3 198022430
+chr4 191154276
+chr5 180915260
+chr6 171115067
+chr7 159138663
+chr8 146364022
+chr9 141213431
+chr10 135534747
+chr11 135006516
+chr12 133851895
+chr13 115169878
+chr14 107349540
+chr15 102531392
+chr16 90354753
+chr17 81195210
+chr18 78077248
+chr19 59128983
+chr20 63025520
+chr21 48129895
+chr22 51304566
+chrX 155270560
+chrY 59373566
+chrM 16571
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/genome_tables/.svn/text-base/genome_table.mm9.txt.svn-base	Fri Jan 18 11:17:38 2013 -0500
@@ -0,0 +1,22 @@
+chr1 197195432
+chr2 181748087
+chr3 159599783
+chr4 155630120
+chr5 152537259
+chr6 149517037
+chr7 152524553
+chr8 131738871
+chr9 124076172
+chr10 129993255
+chr11 121843856
+chr12 121257530
+chr13 120284312
+chr14 125194864
+chr15 103494974
+chr16 98319150
+chr17 95272651
+chr18 90772031
+chr19 61342430
+chrX 166650296
+chrY 15902555
+chrM 16299
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/genome_tables/.svn/text-base/genome_table.worm.ws220.txt.svn-base	Fri Jan 18 11:17:38 2013 -0500
@@ -0,0 +1,7 @@
+I 15072423
+II 15279345
+III 13783700
+IV 17493793
+V 20924149
+X 17718866
+MtDNA 13794
\ No newline at end of file
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/genome_tables/genome_table.dmel.r5.32.txt	Fri Jan 18 11:17:38 2013 -0500
@@ -0,0 +1,15 @@
+YHet	347038
+dmel_mitochondrion_genome	19517
+2L	23011544
+X	22422827
+3L	24543557
+4	1351857
+2R	21146708
+3R	27905053
+Uextra	29004656
+2RHet	3288761
+2LHet	368872
+3LHet	2555491
+3RHet	2517507
+U	10049037
+XHet	204112
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/genome_tables/genome_table.human.hg18.txt	Fri Jan 18 11:17:38 2013 -0500
@@ -0,0 +1,25 @@
+chr1 247249719
+chr2 242951149
+chr3 199501827
+chr4 191273063
+chr5 180857866
+chr6 170899992
+chr7 158821424
+chr8 146274826
+chr9 140273252
+chr10 135374737
+chr11 134452384
+chr12 132349534
+chr13 114142980
+chr14 106368585
+chr15 100338915
+chr16 88827254
+chr17 78774742
+chr18 76117153
+chr19 63811651
+chr20 62435964
+chr21 46944323
+chr22 49691432
+chrX 154913754
+chrY 57772954
+chrM 16571
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/genome_tables/genome_table.human.hg19.txt	Fri Jan 18 11:17:38 2013 -0500
@@ -0,0 +1,25 @@
+chr1 249250621
+chr2 243199373
+chr3 198022430
+chr4 191154276
+chr5 180915260
+chr6 171115067
+chr7 159138663
+chr8 146364022
+chr9 141213431
+chr10 135534747
+chr11 135006516
+chr12 133851895
+chr13 115169878
+chr14 107349540
+chr15 102531392
+chr16 90354753
+chr17 81195210
+chr18 78077248
+chr19 59128983
+chr20 63025520
+chr21 48129895
+chr22 51304566
+chrX 155270560
+chrY 59373566
+chrM 16571
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/genome_tables/genome_table.mm9.txt	Fri Jan 18 11:17:38 2013 -0500
@@ -0,0 +1,22 @@
+chr1 197195432
+chr2 181748087
+chr3 159599783
+chr4 155630120
+chr5 152537259
+chr6 149517037
+chr7 152524553
+chr8 131738871
+chr9 124076172
+chr10 129993255
+chr11 121843856
+chr12 121257530
+chr13 120284312
+chr14 125194864
+chr15 103494974
+chr16 98319150
+chr17 95272651
+chr18 90772031
+chr19 61342430
+chrX 166650296
+chrY 15902555
+chrM 16299
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/genome_tables/genome_table.worm.ws220.txt	Fri Jan 18 11:17:38 2013 -0500
@@ -0,0 +1,7 @@
+I 15072423
+II 15279345
+III 13783700
+IV 17493793
+V 20924149
+X 17718866
+MtDNA 13794
\ No newline at end of file